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The map label for this gene is 218708139

Identifier: 218708139

GI number: 218708139

Start: 60304

End: 60804

Strand: Reverse

Name: 218708139

Synonym: VS_0067

Alternate gene names: NA

Gene position: 60804-60304 (Counterclockwise)

Preceding gene: 218708146

Following gene: 218708137

Centisome position: 1.84

GC content: 47.9

Gene sequence:

>501_bases
TTGCTCTTTGCTGATAAAGCCAAAACACCCTTCCAACACTATAAATTGGTAAGCATGTACTTACCTTGGGAATGTAAAGT
GAGTTTAATGGATATGTCTCGTCGAATTTTAAGCGTTGTCATCGCAGTTTTAACCTTTTCAACTGGCGCTATGGCTTCAG
GCCTAAGCGAAGCAGAGCAAGATGCTATTGCTGAACGCATCAAACCAGTTGGCCAAGTTTACCTAGTCGGCAGCGAGCCA
GTAGCCGCAGAACCAACAGGCCCTCGTGATGGCGCAACAGTTTACGGTACCTTTTGTATCGCTTGTCACGCATCTGGCGT
AAGTGGCGCACCTAAAACAGGTGATGCTGGTGACTGGGGTCCTCGTATTGCCCAAGGTCGCGATATCCTAGCTGACCACG
CAATCAACGGCTTCAATGCTATGCCAGCGAAAGGTTCATGTATGGACTGTTCAGACGACGAAATCAAAGATGCTATCGAG
CACATGATTGCCGGTCTGTAA

Upstream 100 bases:

>100_bases
CCCTTATTTGAGTACTACAACCCACCGCAGCTTATAAGTTGTTGTTTATTGCAACAACTTATCGGGATATAATCACCCAT
TATTTACATTGGTTTAACAG

Downstream 100 bases:

>100_bases
TTTACCGATCTGTAATTAAAAATACCAAATTCAAAAAAGGTGACCTCATGGTCACCTTTTTATTGGTCTCGATTTAGAGC
CAAACATCACTTCTTATTGA

Product: cytochrome c5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MLFADKAKTPFQHYKLVSMYLPWECKVSLMDMSRRILSVVIAVLTFSTGAMASGLSEAEQDAIAERIKPVGQVYLVGSEP
VAAEPTGPRDGATVYGTFCIACHASGVSGAPKTGDAGDWGPRIAQGRDILADHAINGFNAMPAKGSCMDCSDDEIKDAIE
HMIAGL

Sequences:

>Translated_166_residues
MLFADKAKTPFQHYKLVSMYLPWECKVSLMDMSRRILSVVIAVLTFSTGAMASGLSEAEQDAIAERIKPVGQVYLVGSEP
VAAEPTGPRDGATVYGTFCIACHASGVSGAPKTGDAGDWGPRIAQGRDILADHAINGFNAMPAKGSCMDCSDDEIKDAIE
HMIAGL
>Mature_166_residues
MLFADKAKTPFQHYKLVSMYLPWECKVSLMDMSRRILSVVIAVLTFSTGAMASGLSEAEQDAIAERIKPVGQVYLVGSEP
VAAEPTGPRDGATVYGTFCIACHASGVSGAPKTGDAGDWGPRIAQGRDILADHAINGFNAMPAKGSCMDCSDDEIKDAIE
HMIAGL

Specific function: It is unreactive with cytochrome c reductase or oxidase [H]

COG id: COG3245

COG function: function code C; Cytochrome c5

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR002323 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17580; Mature: 17580

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFADKAKTPFQHYKLVSMYLPWECKVSLMDMSRRILSVVIAVLTFSTGAMASGLSEAEQ
CCCCCCCCCCHHHHEEEHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DAIAERIKPVGQVYLVGSEPVAAEPTGPRDGATVYGTFCIACHASGVSGAPKTGDAGDWG
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEHEEHEEEEECCCCCCCCCCCCCCCCC
PRIAQGRDILADHAINGFNAMPAKGSCMDCSDDEIKDAIEHMIAGL
CCHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLFADKAKTPFQHYKLVSMYLPWECKVSLMDMSRRILSVVIAVLTFSTGAMASGLSEAEQ
CCCCCCCCCCHHHHEEEHEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
DAIAERIKPVGQVYLVGSEPVAAEPTGPRDGATVYGTFCIACHASGVSGAPKTGDAGDWG
HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEHEEHEEEEECCCCCCCCCCCCCCCCC
PRIAQGRDILADHAINGFNAMPAKGSCMDCSDDEIKDAIEHMIAGL
CCHHCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2993632 [H]