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The map label for this gene is yidD [C]

Identifier: 218708092

GI number: 218708092

Start: 3965

End: 4222

Strand: Reverse

Name: yidD [C]

Synonym: VS_0004

Alternate gene names: 218708092

Gene position: 4222-3965 (Counterclockwise)

Preceding gene: 218708093

Following gene: 218708091

Centisome position: 0.13

GC content: 45.35

Gene sequence:

>258_bases
ATGGCTTCGCCTGTCTCGCCCTTCGCGTGGATAGCGCTAATACCCATCTATTTTTATAGATGGTTTATTAGTCCACTCAT
CGGCCCACGCTGCCGATTTACTCCAACCTGCTCTTTATATGCGATAGAAGCGTTGAAAGCTCACGGTTTTGTAAAAGGGT
GTTGGTTATCAGGCAAACGTCTATTAAAATGCCATCCTTTGAACGAAGGGGGCTTTGACCCCGTTCCACCAGTCCAAAAA
CAAGACAGAGATAAATAA

Upstream 100 bases:

>100_bases
ACACTCAACACAAACTTCCTAACAAAGATTATGTTGTAATCGCTAAGAAGAGCGCGCAAGATTTAAGCAATGAAGAAATG
TTCAAGCTACTCGACAAATT

Downstream 100 bases:

>100_bases
CGATGGATTCTCAACGTAATATCCTGTTAATCGCATTGGCTTTGGTTTCTTTCCTACTGTTCCAACAATGGAACGTAGCT
CAGAACCCAGCTCCACAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MASPVSPFAWIALIPIYFYRWFISPLIGPRCRFTPTCSLYAIEALKAHGFVKGCWLSGKRLLKCHPLNEGGFDPVPPVQK
QDRDK

Sequences:

>Translated_85_residues
MASPVSPFAWIALIPIYFYRWFISPLIGPRCRFTPTCSLYAIEALKAHGFVKGCWLSGKRLLKCHPLNEGGFDPVPPVQK
QDRDK
>Mature_84_residues
ASPVSPFAWIALIPIYFYRWFISPLIGPRCRFTPTCSLYAIEALKAHGFVKGCWLSGKRLLKCHPLNEGGFDPVPPVQKQ
DRDK

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=84, Percent_Identity=55.952380952381, Blast_Score=97, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y004_VIBSL (B7VGH8)

Other databases:

- EMBL:   FM954972
- RefSeq:   YP_002415713.1
- GeneID:   7159702
- GenomeReviews:   FM954972_GR
- KEGG:   vsp:VS_0004
- HOGENOM:   HBG634291
- OMA:   RYCISPL
- ProtClustDB:   CLSK2517499
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 9649; Mature: 9518

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASPVSPFAWIALIPIYFYRWFISPLIGPRCRFTPTCSLYAIEALKAHGFVKGCWLSGKR
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCE
LLKCHPLNEGGFDPVPPVQKQDRDK
EEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASPVSPFAWIALIPIYFYRWFISPLIGPRCRFTPTCSLYAIEALKAHGFVKGCWLSGKR
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCE
LLKCHPLNEGGFDPVPPVQKQDRDK
EEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA