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The map label for this gene is mioC [H]

Identifier: 218708089

GI number: 218708089

Start: 367

End: 834

Strand: Reverse

Name: mioC [H]

Synonym: VS_0001

Alternate gene names: 218708089

Gene position: 834-367 (Counterclockwise)

Preceding gene: 218708090

Following gene: NA

Centisome position: 0.03

GC content: 44.66

Gene sequence:

>468_bases
ATGCTGGCCTTCTTCTTTAGTAAGGACAGCTTAATGATCCACATTATTACAGGTAGCACCTTAGGTGGTGCAGAGTACGT
TGGCGATCACCTTAATGATCTTCTTGAAGAGCAAGGTCATGAAATAACCCTTCATAATCAGCCTGAATACGATGATATCC
CCCAACAAGGCTTTTGGTTGTTGGTCACTTCAACTCATGGTGCCGGTGAATTTCCAGATAATATTAAGCCGTTTATCGAC
GCATTGACCCAGCAATCTCCAGATTTAAGCCAGGTTCGCTTTGCTGTAGTGGCGCTTGGAGATTCGAGCTACGATACCTT
CTGTTTGGCAGGTAAATCAGTCCACAGCCAACTAAAAGAGCTCGGTGCTCAAGCGATTTCTGGCTGTTTTACCATCGATG
TTCTTGAAACACCGGTCCCAGAAGATGCTGCAGAGGAATGGTTTAACGATCATAGTGACCAGTTTTAA

Upstream 100 bases:

>100_bases
AGCACCTCAATGAGATCACGGGTGAGTTCAGTTCAGACGATCTTTTAGGTCGCATCTTCTCTTCATTCTGTATTGGTAAA
TAACCTTAAAAGGCCAGCTC

Downstream 100 bases:

>100_bases
CACCCCAATCTTCTAAAAAGCGGCTTATGCCGCTTTTTTTGTCTCTGAAAATCGTGACTGTGAATAACTTTTTTGAAAAT
AAATCGAAATGCATGTCCTT

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MLAFFFSKDSLMIHIITGSTLGGAEYVGDHLNDLLEEQGHEITLHNQPEYDDIPQQGFWLLVTSTHGAGEFPDNIKPFID
ALTQQSPDLSQVRFAVVALGDSSYDTFCLAGKSVHSQLKELGAQAISGCFTIDVLETPVPEDAAEEWFNDHSDQF

Sequences:

>Translated_155_residues
MLAFFFSKDSLMIHIITGSTLGGAEYVGDHLNDLLEEQGHEITLHNQPEYDDIPQQGFWLLVTSTHGAGEFPDNIKPFID
ALTQQSPDLSQVRFAVVALGDSSYDTFCLAGKSVHSQLKELGAQAISGCFTIDVLETPVPEDAAEEWFNDHSDQF
>Mature_155_residues
MLAFFFSKDSLMIHIITGSTLGGAEYVGDHLNDLLEEQGHEITLHNQPEYDDIPQQGFWLLVTSTHGAGEFPDNIKPFID
ALTQQSPDLSQVRFAVVALGDSSYDTFCLAGKSVHSQLKELGAQAISGCFTIDVLETPVPEDAAEEWFNDHSDQF

Specific function: Probable electron transporter required for biotin synthase activity [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1790181, Length=137, Percent_Identity=47.4452554744526, Blast_Score=141, Evalue=2e-35,
Organism=Escherichia coli, GI1789154, Length=137, Percent_Identity=36.4963503649635, Blast_Score=87, Evalue=6e-19,
Organism=Escherichia coli, GI1789123, Length=139, Percent_Identity=35.2517985611511, Blast_Score=69, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17566446, Length=128, Percent_Identity=32.03125, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 17089; Mature: 17089

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAFFFSKDSLMIHIITGSTLGGAEYVGDHLNDLLEEQGHEITLHNQPEYDDIPQQGFWL
CEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEE
LVTSTHGAGEFPDNIKPFIDALTQQSPDLSQVRFAVVALGDSSYDTFCLAGKSVHSQLKE
EEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHEEEEEEECCCCCCEEEECCHHHHHHHHH
LGAQAISGCFTIDVLETPVPEDAAEEWFNDHSDQF
HHHHHHCCEEEEEEECCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLAFFFSKDSLMIHIITGSTLGGAEYVGDHLNDLLEEQGHEITLHNQPEYDDIPQQGFWL
CEEEEEECCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEE
LVTSTHGAGEFPDNIKPFIDALTQQSPDLSQVRFAVVALGDSSYDTFCLAGKSVHSQLKE
EEEECCCCCCCCCCHHHHHHHHHCCCCCHHHHEEEEEEECCCCCCEEEECCHHHHHHHHH
LGAQAISGCFTIDVLETPVPEDAAEEWFNDHSDQF
HHHHHHCCEEEEEEECCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]