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The map label for this gene is ydjH [H]

Identifier: 218705270

GI number: 218705270

Start: 2089185

End: 2090132

Strand: Reverse

Name: ydjH [H]

Synonym: ECUMN_2061

Alternate gene names: 218705270

Gene position: 2090132-2089185 (Counterclockwise)

Preceding gene: 218705271

Following gene: 218705269

Centisome position: 40.18

GC content: 45.36

Gene sequence:

>948_bases
ATGGATAATCTCGACGTTATTTGTATAGGTGCCGCTATTGTTGATATTCCATTGCAACCGGTCAGTAAAAATATCTTTGA
TGTGGATTCTTATCCTCTTGAAAGAATCGCAATGACCACCGGGGGTGATGCAATAAATGAAGCAACAATTATTTCTCGTC
TGGGCCATCGCACAGCATTAATGAGTCGTGTTGGTAAAGATGCCGCAGGACAATTTATTCTCGACCATTGCCGCAAAGAG
AATATTGATATTCAAAGCCTGAAGCAGGACGTCAGCATAGATACCTCTATTAACGTTGGACTGGTGACGGAGGATGGCGA
GCGGACGTTTGTCACAAACCGTAACGGCAGTCTGTGGAAATTGAATATTGACGATGTTGATTTTGCGCGGTTTTCTCAGG
CGAAATTATTATCACTGGCCAGTATTTTCAACAGTCCTCTATTGGATGGTAAAGCGCTAACAGAAATTTTTACGCAAGCT
AAAGCCCGGCAGATGATTATCTGTGCCGATATGATCAAACCACGGTTGAATGAAACGCTGGATGATATTTGCGAAGCATT
GAGTTTTGTCGATTATCTGTTTCCTAATTTTGCCGAGGCAAAATTACTCACCGGGAAAGAGACACTGGATGAAATTGCTG
ACTGCTTTCTTGCGTGCGGCGTAAAAACGGTGGTGATTAAAACGGGTAAAGACGGCTGCTTTATCAAGCGTGGTGACATG
ACGATGAAGGTGCCGGCGGTCGCAGGAATAACCGCCATCGACACCATTGGCGCGGGCGATAACTTTGCTTCAGGTTTTAT
TGCGGCACTGTTAGAAGGCAAAAATCTGCGTGAATGCGCACGCTTTGCCAATGCAACGGCGGCTATCTCGGTTCTAAGCG
TCGGTGCCACCACCGGCGTAAAAAACAGAAAGCTGGTCGAACAATTGCTGGAAGAATACGAAGGATAA

Upstream 100 bases:

>100_bases
CCTTTCCTGCATTTAGAACGTGAAGTACGTAAAGCTGTAAAAGAACGGGCATTGGAAAAAATTAAACTGTTCGGTTCTGA
TGGCAAAGCGGAATAATGAT

Downstream 100 bases:

>100_bases
TGAAGGCAAATGAAAAAGATACCTTTAGGCACAACGGATATTACGCTTTCGCGAATGGGGTTGGGGACATGGGCCATTGG
CGGCGGTCCTGCATGGAATG

Product: putative sugar kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRVGKDAAGQFILDHCRKE
NIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQA
KARQMIICADMIKPRLNETLDDICEALSFVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG

Sequences:

>Translated_315_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRVGKDAAGQFILDHCRKE
NIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQA
KARQMIICADMIKPRLNETLDDICEALSFVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG
>Mature_315_residues
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTALMSRVGKDAAGQFILDHCRKE
NIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWKLNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQA
KARQMIICADMIKPRLNETLDDICEALSFVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGVKNRKLVEQLLEEYEG

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=315, Percent_Identity=99.3650793650794, Blast_Score=637, Evalue=0.0,
Organism=Escherichia coli, GI1790193, Length=301, Percent_Identity=30.8970099667774, Blast_Score=76, Evalue=3e-15,
Organism=Escherichia coli, GI87082281, Length=276, Percent_Identity=27.8985507246377, Blast_Score=74, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: NA

Molecular weight: Translated: 34092; Mature: 34092

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00583 PFKB_KINASES_1 ; PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTAL
CCCCCEEEEEEEEEECCCCHHCCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHH
MSRVGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWK
HHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCEEE
LNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETL
EECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
DDICEALSFVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
HHHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCC
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGV
EEECCCHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCC
KNRKLVEQLLEEYEG
CHHHHHHHHHHHHCC
>Mature Secondary Structure
MDNLDVICIGAAIVDIPLQPVSKNIFDVDSYPLERIAMTTGGDAINEATIISRLGHRTAL
CCCCCEEEEEEEEEECCCCHHCCCCCCCCCCCHHHEEEECCCCHHHHHHHHHHHHHHHHH
MSRVGKDAAGQFILDHCRKENIDIQSLKQDVSIDTSINVGLVTEDGERTFVTNRNGSLWK
HHHHCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCEEEEEEECCCEEEEECCCCCEEE
LNIDDVDFARFSQAKLLSLASIFNSPLLDGKALTEIFTQAKARQMIICADMIKPRLNETL
EECCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHH
DDICEALSFVDYLFPNFAEAKLLTGKETLDEIADCFLACGVKTVVIKTGKDGCFIKRGDM
HHHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEECCC
TMKVPAVAGITAIDTIGAGDNFASGFIAALLEGKNLRECARFANATAAISVLSVGATTGV
EEECCCHHCCHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHCCCCCC
KNRKLVEQLLEEYEG
CHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]