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The map label for this gene is ydhQ [H]

Identifier: 218705164

GI number: 218705164

Start: 1979648

End: 1980904

Strand: Reverse

Name: ydhQ [H]

Synonym: ECUMN_1954

Alternate gene names: 218705164

Gene position: 1980904-1979648 (Counterclockwise)

Preceding gene: 218705167

Following gene: 218705162

Centisome position: 38.08

GC content: 50.91

Gene sequence:

>1257_bases
ATGGGATCTGATGCGAAAAACTTGATGAGCGACGGGAACGTGCAAATTGTTAAGACCGGCGAGGTCATTGGCGCGACGCA
ACTTACTGAAGGTGAGTTAATTGTTGAAGCTGGCGGAAGAGCCGAAAATACCGTGGTCACGGGGGCTGGCTGGTTGAAAG
TGGCAACCGGTGGGATCGCCAAATGCACACAGTACGGCAACAATGGCACGCTATCGGTCAGCGACGGTGCCATTGCCACA
GATATTGTTCAGTCCGAGGGAGGCGCAATTAGTCTCTCTACGCTCGCTACGGTTAATGGCCGCCATCCCGAAGGTGAATT
CAGCGTTGATAAAGGTTATGCCTGCGGTTTGTTGCTGGAAAATGGCGGTAACCTGCGTGTACTGGAAGGCCATCGCGCGG
AAAAAATTATTCTCGATCAAGAGGGTGGCCTGTTGGTCAATGGGACAACCTCAGCGGTCGTGGTAGATGAAGGTGGTGAA
TTGTTGGTGTATCCAGGTGGGGAAGCCAGCAATTGTGAGATTAATCAGGGCGGCGTTTTTATGCTGGCGGGGAAAGCCAG
TGATACATTGCTTGCTGGTGGCACCATGAATAATCTCGGTGGTGAAGACTCTGACACTATTGTTGAGAATGGATCCACTT
ATCGTCTGGGGACGGATGGTCTTCAGCTCTACAGTTCCGGTAAGACGCAAAACCTGTCCGTTAATGTGGGTGGTCGGGCT
GAAGTGCATGCCGGTACGCTGGAAAATGCGGTAATACAAGGTGGGACAGTCATCCTGTTGTCACCCACCAGCGCGGACGA
AAATTTTGTCGTAGAGGAAGATCGCGCACCGGTTGAACTGACCGGTAGTGTTGCATTACTGGACGGCGCTTCAATGATTA
TTGGCTATGGCGCAGATCTGCAACAATCAACGATTACTGTACAGCAGGGCGGTGTATTGATTCTCGACGGCAGTATGGTA
AAAGGTGACAGTGTCACTTTCAATGTTGGTAACATCAATCTAAATGGCGGAAAACTGTGGCTAATCACTGGTGCGGCAAC
GCATGTGCAACTGAAAGTGAAACGCCTGCGTGGAGAGGGAGCCATTTGCCTGCAAACCAGTGCGAAAGAAATTTCACCTG
ACTTCATCAATGTGAAAGGGGAAGTTACTGGTGATATACACGTTGAGATAACAGATGCCAGTCGGCAAACTCTGTGTAAC
GCACTGAAACTACAGCCAGACGAAGACGGGATTGGCGCAACGCTCCAGCCTGCGTAA

Upstream 100 bases:

>100_bases
GTTGTTTGCCACCATCTCAAAATCTGTCGTGGATAAATCCTCCGTAGCCTTTACACTTAGGTAGCAATAAAGGCACACAG
ATGCAGCAAAGGAATAAATC

Downstream 100 bases:

>100_bases
AAACACAGGCGCAACCCGTGAAGTTTGCGCCTTGTCTTTACTAGCGAGCTGCTCGTTGCAGAATGATGGCTGACGGCAGA
CGTTGCAGGAACCGCATACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIAT
DIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGE
LLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSTYRLGTDGLQLYSSGKTQNLSVNVGGRA
EVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSMV
KGDSVTFNVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCN
ALKLQPDEDGIGATLQPA

Sequences:

>Translated_418_residues
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIAT
DIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGE
LLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSTYRLGTDGLQLYSSGKTQNLSVNVGGRA
EVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSMV
KGDSVTFNVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCN
ALKLQPDEDGIGATLQPA
>Mature_417_residues
GSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATD
IVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGEL
LVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSTYRLGTDGLQLYSSGKTQNLSVNVGGRAE
VHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSMVK
GDSVTFNVGNINLNGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNA
LKLQPDEDGIGATLQPA

Specific function: Unknown

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787954, Length=418, Percent_Identity=98.8038277511962, Blast_Score=813, Evalue=0.0,
Organism=Escherichia coli, GI48994897, Length=381, Percent_Identity=30.4461942257218, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI87082145, Length=374, Percent_Identity=27.5401069518717, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012332
- InterPro:   IPR011050
- InterPro:   IPR004899 [H]

Pfam domain/function: PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 42824; Mature: 42692

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIA
CCCCHHHHHCCCCEEEEEECCEEEEEEECCCCEEEEECCCCCCEEEECCCEEEEECCCCE
KCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLE
EHEECCCCCEEEECCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCEEECCCCEEEEEEE
NGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVF
CCCCEEEEECCCCEEEEEECCCCEEEECCCEEEEEECCCCEEEECCCCCCCCEECCCCEE
MLAGKASDTLLAGGTMNNLGGEDSDTIVENGSTYRLGTDGLQLYSSGKTQNLSVNVGGRA
EEECCCCCEEEECCCCCCCCCCCCCEEEECCCEEEECCCCEEEEECCCCEEEEEEECCCE
EVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADL
EEECCCCCCEEECCCEEEEECCCCCCCCEEEECCCCCEEEECCEEEECCCEEEEEECCCC
QQSTITVQQGGVLILDGSMVKGDSVTFNVGNINLNGGKLWLITGAATHVQLKVKRLRGEG
CCEEEEEECCCEEEEECCEECCCEEEEEECEEEECCCEEEEEECCCEEEEEEEEEECCCC
AICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
EEEEECCCCCCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCEEECCC
>Mature Secondary Structure 
GSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENTVVTGAGWLKVATGGIA
CCCHHHHHCCCCEEEEEECCEEEEEEECCCCEEEEECCCCCCEEEECCCEEEEECCCCE
KCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRHPEGEFSVDKGYACGLLLE
EHEECCCCCEEEECCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCEEECCCCEEEEEEE
NGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGELLVYPGGEASNCEINQGGVF
CCCCEEEEECCCCEEEEEECCCCEEEECCCEEEEEECCCCEEEECCCCCCCCEECCCCEE
MLAGKASDTLLAGGTMNNLGGEDSDTIVENGSTYRLGTDGLQLYSSGKTQNLSVNVGGRA
EEECCCCCEEEECCCCCCCCCCCCCEEEECCCEEEECCCCEEEEECCCCEEEEEEECCCE
EVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRAPVELTGSVALLDGASMIIGYGADL
EEECCCCCCEEECCCEEEEECCCCCCCCEEEECCCCCEEEECCEEEECCCEEEEEECCCC
QQSTITVQQGGVLILDGSMVKGDSVTFNVGNINLNGGKLWLITGAATHVQLKVKRLRGEG
CCEEEEEECCCEEEEECCEECCCEEEEEECEEEECCCEEEEEECCCEEEEEEEEEECCCC
AICLQTSAKEISPDFINVKGEVTGDIHVEITDASRQTLCNALKLQPDEDGIGATLQPA
EEEEECCCCCCCCCEEEEEEEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]