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The map label for this gene is ydfR [H]

Identifier: 218705057

GI number: 218705057

Start: 1869970

End: 1870257

Strand: Reverse

Name: ydfR [H]

Synonym: ECUMN_1842

Alternate gene names: 218705057

Gene position: 1870257-1869970 (Counterclockwise)

Preceding gene: 218705058

Following gene: 218705056

Centisome position: 35.95

GC content: 43.75

Gene sequence:

>288_bases
GTGAAAGGAGTCCGTAATTTTGAGAATAAAGTTACGGTAACTGTAGCCTTACAGGACAAAGAACGCTTTGACGGTGAAAT
TTTTGACCTGGATGTCGCCATGGACCGTGTTGAAGGAGCTGCGCTGGAGTTTTATGAGGCAGCAGCCAGAAGGAGCGTCC
GGCAAGTCTTCCTGGAAGTAGCAGAAAAATTGTCAGAAAAAGTTGAGTCTTATCTGCAGCATCAGTACTCCTTTAAGATT
GAAAATCCTGCCAATAAGCACGAGCGTCCTCATCATAAATATATATGA

Upstream 100 bases:

>100_bases
CTGCTGACGTATCTGACAAATCTTTATTTCAAGATTAAAGAAGACAGGCGTAAGGCTGCGAGAGGAGAGTAATCCAACGA
CTCAAGACTATGAACTGGTT

Downstream 100 bases:

>100_bases
ACACAAAAATCAGATACGGCCTGTCGGCTGCCGTTCTGGCGCTGATTGGTGCTGGCGCATCTGCTCCTCAGATACTTGAC
CAGTTTCTGGACGAAAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYLQHQYSFKI
ENPANKHERPHHKYI

Sequences:

>Translated_95_residues
MKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYLQHQYSFKI
ENPANKHERPHHKYI
>Mature_95_residues
MKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEVAEKLSEKVESYLQHQYSFKI
ENPANKHERPHHKYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787837, Length=95, Percent_Identity=97.8947368421053, Blast_Score=192, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009759 [H]

Pfam domain/function: PF07041 DUF1327 [H]

EC number: NA

Molecular weight: Translated: 11143; Mature: 11143

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEV
CCCCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AEKLSEKVESYLQHQYSFKIENPANKHERPHHKYI
HHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKGVRNFENKVTVTVALQDKERFDGEIFDLDVAMDRVEGAALEFYEAAARRSVRQVFLEV
CCCCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
AEKLSEKVESYLQHQYSFKIENPANKHERPHHKYI
HHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]