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The map label for this gene is yedU [C]

Identifier: 218704988

GI number: 218704988

Start: 1797459

End: 1798160

Strand: Reverse

Name: yedU [C]

Synonym: ECUMN_1772

Alternate gene names: 218704988

Gene position: 1798160-1797459 (Counterclockwise)

Preceding gene: 218704989

Following gene: 218704987

Centisome position: 34.57

GC content: 51.99

Gene sequence:

>702_bases
GTGAGGACCGATATGAAACCTGCATATAAACCAGTGCTATGTGTCGTTTCCAGCCATCCGATTAAAGGCGCATCCGGTGT
ACCAACCGGTTTTTTCCTGGCCGAGCTGACTCATCCGCTGAAAGTACTGGAAGATGCCGGAATAAAAACAACAATAGCCA
GTATTCGCGGGGGGCAGCCACCGGTGGATGGATTTGACCTCAGCGACCCTGTTAACGCCTGGTACTGGAACGAAACCGAT
TTTCAGCAGCGCCTGGCAACAACACCTGCGTTATCCGAGCTGAAAGGTGCCGATTACAGCGCAGTTTTCTTTGCAGGTGG
TCATGGGACCATGTGGGATTTCCGTGATAATCAGGATGCCCAGCGTATTATCCGCGAAGTGTATGAAAGTGATGGGATTG
TCTCAGCCGTCTGCCACGGGCCTGCGGCATTGGTTGACGCAAAACTCAGTAGCGGCGAATACCTGATAAAAGGGAAAAAT
GTGGCGGCCTTTACCAACAAGGAAGAGGAAGAAGTTCACACAACAGATGTGGTTCCCTTCCTGCTTGAAACCGCACTTCG
CGAGCATGGTGCGCTTTATCATGAAGCTCCAAACTGGTCTGAAAACGTGGTTACCGACGATCGCCTTATCACGGGGCAGA
ATCCCGCTTCAGCACATGGGGTTGGTGTGGCGCTGTTAAATGCACTCCGCCGGACAGCTTAA

Upstream 100 bases:

>100_bases
TCCCGTTGGCAAAAGCAGGCTTACTAAGCTTCGAGTGTATACCGCTTGGCTCCTTTATTAACTGGGAAAATCTCTTCGCC
GATGAATTTAAAAATAAAGA

Downstream 100 bases:

>100_bases
TTAATTCATCGTTACTCACCTTACTTGGCCGGTTTAAGTCAGCCACGATCCGGCCTTTTTTCAGGAGCTGAATATGAAAA
CACTACCTCCAGTCGCACTA

Product: hypothetical protein

Products: NA

Alternate protein names: ThiJ/PfpI Family Protein; ThiJ/PfpI Domain Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; Peptidase; Protease I; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase-Like Protein; Transcriptional Regulator Fis Family; Protease; Intracellular Protease Amidase; Intracellular Protease/Amidase ThiJ/PfpL Family; Exported Pfp1 Family Protein; Intracellular Protease/Amidase-Like; C56 Family Peptidase; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; ThiJ/PfpI Protein; Regulatory Protein; Pfp1 Family Protein; DJ-1/PfpI-Family Transcriptional Regulator; Fis Family Transcriptional Regulator; Amidotransferase; NonF Protein; ThiJ Protein

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MRTDMKPAYKPVLCVVSSHPIKGASGVPTGFFLAELTHPLKVLEDAGIKTTIASIRGGQPPVDGFDLSDPVNAWYWNETD
FQQRLATTPALSELKGADYSAVFFAGGHGTMWDFRDNQDAQRIIREVYESDGIVSAVCHGPAALVDAKLSSGEYLIKGKN
VAAFTNKEEEEVHTTDVVPFLLETALREHGALYHEAPNWSENVVTDDRLITGQNPASAHGVGVALLNALRRTA

Sequences:

>Translated_233_residues
MRTDMKPAYKPVLCVVSSHPIKGASGVPTGFFLAELTHPLKVLEDAGIKTTIASIRGGQPPVDGFDLSDPVNAWYWNETD
FQQRLATTPALSELKGADYSAVFFAGGHGTMWDFRDNQDAQRIIREVYESDGIVSAVCHGPAALVDAKLSSGEYLIKGKN
VAAFTNKEEEEVHTTDVVPFLLETALREHGALYHEAPNWSENVVTDDRLITGQNPASAHGVGVALLNALRRTA
>Mature_233_residues
MRTDMKPAYKPVLCVVSSHPIKGASGVPTGFFLAELTHPLKVLEDAGIKTTIASIRGGQPPVDGFDLSDPVNAWYWNETD
FQQRLATTPALSELKGADYSAVFFAGGHGTMWDFRDNQDAQRIIREVYESDGIVSAVCHGPAALVDAKLSSGEYLIKGKN
VAAFTNKEEEEVHTTDVVPFLLETALREHGALYHEAPNWSENVVTDDRLITGQNPASAHGVGVALLNALRRTA

Specific function: Not Known. [C]

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6320742, Length=240, Percent_Identity=32.0833333333333, Blast_Score=113, Evalue=2e-26,
Organism=Saccharomyces cerevisiae, GI6324967, Length=240, Percent_Identity=27.0833333333333, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6324975, Length=240, Percent_Identity=27.0833333333333, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6323984, Length=240, Percent_Identity=26.6666666666667, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25275; Mature: 25275

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTDMKPAYKPVLCVVSSHPIKGASGVPTGFFLAELTHPLKVLEDAGIKTTIASIRGGQP
CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PVDGFDLSDPVNAWYWNETDFQQRLATTPALSELKGADYSAVFFAGGHGTMWDFRDNQDA
CCCCCCCCCCCCCEECCCHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCEECCCCCHHH
QRIIREVYESDGIVSAVCHGPAALVDAKLSSGEYLIKGKNVAAFTNKEEEEVHTTDVVPF
HHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHH
LLETALREHGALYHEAPNWSENVVTDDRLITGQNPASAHGVGVALLNALRRTA
HHHHHHHHCCCEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRTDMKPAYKPVLCVVSSHPIKGASGVPTGFFLAELTHPLKVLEDAGIKTTIASIRGGQP
CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
PVDGFDLSDPVNAWYWNETDFQQRLATTPALSELKGADYSAVFFAGGHGTMWDFRDNQDA
CCCCCCCCCCCCCEECCCHHHHHHHHCCHHHHHHCCCCCEEEEEECCCCCEECCCCCHHH
QRIIREVYESDGIVSAVCHGPAALVDAKLSSGEYLIKGKNVAAFTNKEEEEVHTTDVVPF
HHHHHHHHHCCCEEEEECCCCHHHHHHCCCCCCEEEECCCEEEECCCCHHHHHHHHHHHH
LLETALREHGALYHEAPNWSENVVTDDRLITGQNPASAHGVGVALLNALRRTA
HHHHHHHHCCCEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA