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The map label for this gene is yddA [H]

Identifier: 218704967

GI number: 218704967

Start: 1775626

End: 1777311

Strand: Reverse

Name: yddA [H]

Synonym: ECUMN_1750

Alternate gene names: 218704967

Gene position: 1777311-1775626 (Counterclockwise)

Preceding gene: 218704968

Following gene: 218704966

Centisome position: 34.17

GC content: 43.36

Gene sequence:

>1686_bases
ATGATAACCATTCCCATTACGTTTCGTATGTTGATAGCAAAGTATCTCTGTCTGCTGAAGCCCTTTTGGCTGCGTAAGAA
TAATAAAACTTCAGTGCTGTTAATCATTATTATCCTCGCCATGATCCTTGGCGTGGTTAAAATTCAGGTCTGGTTAAACG
ACTGGAATAATGATTTTTTCAATGCGCTAAGCCAGAAAGAAACCGATAAGCTTTGGCAGCTTGTCCTTTGGTTCCCTGCC
CTGCTGGGGATCTTTGTATTAATATCCGTAAACAAAACATGGTTAATTAAACTACTGACTATTCGCTGGCGCGAATGGTT
AACAGATTACTACCTTAATCGCTGGTTTGCAGATAAAAACTACTACTTCACGCAGATCTACGGTGAGCATAAAAATACAG
ATAACCCTGACCAACGTATCGCTGAAGACATTCTCTTACTGATCAGCAAAACGCTCAGTCTTTCATTTGGCTTCATCCAG
TCACTTAGCATGTTGATCACCTTTACCGTTATTCTTTGGCAAAGCGCGGGTACGCTCTCATTCACTGTTGGTGGAACAGA
ATGGAATATCCAGGGGTATATGGTCTATACCGTCGTGCTCATTGTGATCGGTGGAACTTTATTTACTCATAAGGTGGGTA
AACGTATTCGTCCGCTTAATGTGGAAAAACAACGTAGCGAAGCGACATTTCGAACTAATCTTGTGCAGCATAATAAGCAG
GCTGAACTGATTGCGCTAAGCAATGCTGAGTCTCTACAACGCCAGGAGTTGAGCGACAATTTTCATACCATTAAAGATAA
CTGGCATCGTTTAATGAATCGTCAGCGGTGGCTTGATTACTGGCAGAATATTTATTCGCGCTCGCTTAGCGTTCTTCCCT
ACTTTCTGTTATTGCCGCAGTTTATTAGCGGACAGATCAATCTGGGCGGACTGATGAAATCGCGCCAGGCATTTATGCTG
GTATCGAACAATTTAAGCTGGTTTATTTATAAATATGATGAACTTGCTGAACTGGCTGCGGTTATCGATCGCTTGTATGA
GTTCCATCAACTCACCGAACAGCGCCCTACGAATAAGCCTAAAAATTGCCAACATGCGGTACAAGTGGCTGACGCGAGTA
TTCGTACTCCTGATAATAAGATCATATTAGAGAACCTAAACTTTCATGTTTCGCCAGGCAAATGGCTATTACTGAAAGGT
TACTCTGGTGCGGGAAAAACCACACTGCTTAAAACATTATCCCACTGCTGGCCGTGGTTTAAAGGTGATATTTCGTCTCC
TGCTGACAGTTGGTATGTGTCACAAACACCGTTAATCAAAACCGGCTTACTGAAAGAGATAATTTGTAAAGCACTTCCCC
TGCCCGTAGACGATAAATCGTTGAGCGAAGTACTGCATCAGGTTGGTCTGGGGAAATTGGCTGCGCGTATTCATGACCAC
GATCGCTGGGGAGATATTCTTTCCAGCGGCGAAAAACAACGTATCGCCGTGGCACGATTAATTTTACGACGTCCGAAATG
GATATTTCTTGACGAAACTACCTCTCATCTTGAGGAACAAGAGGCTATCCGCTTACTGCGTTTAGTGCGTGAAAAACTAC
CCTCAAGCGGCGTCATTATGGTTACACATCAACCCGGTGTCTGGAACCTGGCCGATGATATTTGTGACATTAGCGCGGTT
TTATAA

Upstream 100 bases:

>100_bases
AATTTCTTTATATTTCAAAATGTTAAATGACACTTAAATAAATTTCATCAGTAAATCATTGCCATAGATAATCATTGGAT
GGCACAATCAATTTTCGCTA

Downstream 100 bases:

>100_bases
AAACAATAAAAGCCCTGCTGTACGGAGATAAAAATAAATGAAGCGAGTTCTTATTCCTGGCGTCATTTTATGTGGCGCTG
ATGTGGCGCAGGCCGTCGAT

Product: putative multidrug ABC transporter permease/ATP-binding protein

Products: NA

Alternate protein names: CDS102 [H]

Number of amino acids: Translated: 561; Mature: 561

Protein sequence:

>561_residues
MITIPITFRMLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILGVVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPA
LLGIFVLISVNKTWLIKLLTIRWREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQ
SLSMLITFTVILWQSAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRPLNVEKQRSEATFRTNLVQHNKQ
AELIALSNAESLQRQELSDNFHTIKDNWHRLMNRQRWLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFML
VSNNLSWFIYKYDELAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVADASIRTPDNKIILENLNFHVSPGKWLLLKG
YSGAGKTTLLKTLSHCWPWFKGDISSPADSWYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLHQVGLGKLAARIHDH
DRWGDILSSGEKQRIAVARLILRRPKWIFLDETTSHLEEQEAIRLLRLVREKLPSSGVIMVTHQPGVWNLADDICDISAV
L

Sequences:

>Translated_561_residues
MITIPITFRMLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILGVVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPA
LLGIFVLISVNKTWLIKLLTIRWREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQ
SLSMLITFTVILWQSAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRPLNVEKQRSEATFRTNLVQHNKQ
AELIALSNAESLQRQELSDNFHTIKDNWHRLMNRQRWLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFML
VSNNLSWFIYKYDELAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVADASIRTPDNKIILENLNFHVSPGKWLLLKG
YSGAGKTTLLKTLSHCWPWFKGDISSPADSWYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLHQVGLGKLAARIHDH
DRWGDILSSGEKQRIAVARLILRRPKWIFLDETTSHLEEQEAIRLLRLVREKLPSSGVIMVTHQPGVWNLADDICDISAV
L
>Mature_561_residues
MITIPITFRMLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILGVVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPA
LLGIFVLISVNKTWLIKLLTIRWREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQ
SLSMLITFTVILWQSAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRPLNVEKQRSEATFRTNLVQHNKQ
AELIALSNAESLQRQELSDNFHTIKDNWHRLMNRQRWLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFML
VSNNLSWFIYKYDELAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVADASIRTPDNKIILENLNFHVSPGKWLLLKG
YSGAGKTTLLKTLSHCWPWFKGDISSPADSWYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLHQVGLGKLAARIHDH
DRWGDILSSGEKQRIAVARLILRRPKWIFLDETTSHLEEQEAIRLLRLVREKLPSSGVIMVTHQPGVWNLADDICDISAV
L

Specific function: Unknown

COG id: COG4178

COG function: function code R; ABC-type uncharacterized transport system, permease and ATPase components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI4826958, Length=523, Percent_Identity=25.0478011472275, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI9945308, Length=518, Percent_Identity=23.3590733590734, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI4506341, Length=532, Percent_Identity=21.8045112781955, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI7262393, Length=553, Percent_Identity=22.9656419529837, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI73747915, Length=249, Percent_Identity=24.4979919678715, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI73747917, Length=249, Percent_Identity=24.4979919678715, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1787772, Length=561, Percent_Identity=99.1087344028521, Blast_Score=1139, Evalue=0.0,
Organism=Escherichia coli, GI1786575, Length=333, Percent_Identity=26.1261261261261, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787112, Length=269, Percent_Identity=27.5092936802974, Blast_Score=77, Evalue=4e-15,
Organism=Escherichia coli, GI1786653, Length=197, Percent_Identity=27.9187817258883, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI72000520, Length=542, Percent_Identity=26.7527675276753, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17564250, Length=537, Percent_Identity=26.4432029795158, Blast_Score=125, Evalue=8e-29,
Organism=Caenorhabditis elegans, GI17532411, Length=599, Percent_Identity=25.0417362270451, Blast_Score=118, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI17532409, Length=505, Percent_Identity=23.7623762376238, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI72000518, Length=565, Percent_Identity=24.6017699115044, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17542146, Length=522, Percent_Identity=21.6475095785441, Blast_Score=101, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI193211017, Length=206, Percent_Identity=30.0970873786408, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17558960, Length=184, Percent_Identity=27.1739130434783, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI193211015, Length=205, Percent_Identity=30.2439024390244, Blast_Score=72, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=189, Percent_Identity=29.6296296296296, Blast_Score=70, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324985, Length=270, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6323217, Length=247, Percent_Identity=25.9109311740891, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24638550, Length=544, Percent_Identity=21.1397058823529, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24638552, Length=544, Percent_Identity=21.1397058823529, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24638554, Length=544, Percent_Identity=21.1397058823529, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24638546, Length=544, Percent_Identity=21.1397058823529, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24638556, Length=544, Percent_Identity=21.1397058823529, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24638548, Length=544, Percent_Identity=21.1397058823529, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24638558, Length=544, Percent_Identity=21.1397058823529, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24643394, Length=533, Percent_Identity=23.4521575984991, Blast_Score=100, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010509
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR017940
- InterPro:   IPR011527
- InterPro:   IPR003593 [H]

Pfam domain/function: PF06472 ABC_membrane_2; PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 64977; Mature: 64977

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIPITFRMLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILGVVKIQVWLNDWNNDFF
CEEECHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHH
NALSQKETDKLWQLVLWFPALLGIFVLISVNKTWLIKLLTIRWREWLTDYYLNRWFADKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQSLSMLITFTVILWQSAGTLS
EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
FTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRPLNVEKQRSEATFRTNLVQHNKQ
EEECCEEEEECHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
AELIALSNAESLQRQELSDNFHTIKDNWHRLMNRQRWLDYWQNIYSRSLSVLPYFLLLPQ
CEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FISGQINLGGLMKSRQAFMLVSNNLSWFIYKYDELAELAAVIDRLYEFHQLTEQRPTNKP
HHCCCCCCCHHHHCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KNCQHAVQVADASIRTPDNKIILENLNFHVSPGKWLLLKGYSGAGKTTLLKTLSHCWPWF
CHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCC
KGDISSPADSWYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLHQVGLGKLAARIHDH
CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHCC
DRWGDILSSGEKQRIAVARLILRRPKWIFLDETTSHLEEQEAIRLLRLVREKLPSSGVIM
HHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VTHQPGVWNLADDICDISAVL
EEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MITIPITFRMLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILGVVKIQVWLNDWNNDFF
CEEECHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHH
NALSQKETDKLWQLVLWFPALLGIFVLISVNKTWLIKLLTIRWREWLTDYYLNRWFADKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
YYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQSLSMLITFTVILWQSAGTLS
EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
FTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRPLNVEKQRSEATFRTNLVQHNKQ
EEECCEEEEECHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
AELIALSNAESLQRQELSDNFHTIKDNWHRLMNRQRWLDYWQNIYSRSLSVLPYFLLLPQ
CEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FISGQINLGGLMKSRQAFMLVSNNLSWFIYKYDELAELAAVIDRLYEFHQLTEQRPTNKP
HHCCCCCCCHHHHCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KNCQHAVQVADASIRTPDNKIILENLNFHVSPGKWLLLKGYSGAGKTTLLKTLSHCWPWF
CHHHHHHHHHCCCCCCCCCEEEEECCCEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCC
KGDISSPADSWYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLHQVGLGKLAARIHDH
CCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCHHHHHHHHHCC
DRWGDILSSGEKQRIAVARLILRRPKWIFLDETTSHLEEQEAIRLLRLVREKLPSSGVIM
HHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VTHQPGVWNLADDICDISAVL
EEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]