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The map label for this gene is cI

Identifier: 218704626

GI number: 218704626

Start: 1419194

End: 1419901

Strand: Reverse

Name: cI

Synonym: ECUMN_1396

Alternate gene names: NA

Gene position: 1419901-1419194 (Counterclockwise)

Preceding gene: 218704637

Following gene: 218704625

Centisome position: 27.29

GC content: 45.34

Gene sequence:

>708_bases
ATGGTTCAGAATGAAAAAGTGCGCAAAGAATTCGCCCAGCGGCTAGCGCAAGCCTGTAAAGAAGCTGGTCTTGATGAACA
TGGTAGGGGAATGGCCATAGCCCGTGCCCTTTCTCTTTCGTCCAAAGGCGTTAGCAAATGGTTTAATGCTGAGTCTTTAC
CACGCCAGGAAAAAATGAATGCGCTTGCGAAATTTCTAAACGTTGATGTTGTTTGGCTTCAGCACGGCACTTCGTTAAAT
GGAGCGAATGATGAAGATACTTTTTCAATTGTTGGCAAATTAAAAAAAGGGTTAGTGCGCGTGGTTGGTGAGGCAATTCT
TGGTGTTGATGGTGCCATCGAGATGACCGAAGAGCGCGATGGGTGGCTCAAGATTTATAGCGATGATCCAGATGCCTTTG
GTCTTCGTGTAAAAGGAGACAGCATGTGGCCCAGAATAAAATCAGGAGAATATGTACTCATTGAGCCTAACACCAAAGTA
TTCCCAGGTGATGAGGTGTTTGTCAGAACCATTGAAGGGCACAACATGATCAAGGTTCTTGGCTATGACAGAGACGGAGA
ATACCAATTTACAAGCATCAACCAAGACCACAGGCCAATAACGTTGCCTTATCATCAAGTAGCAAAGGTGGAGTATGTAG
CTGGTATTCTGAAGCAATCTCGCCACCTAGATGACATCGAGGCCAGGGAATGGCTGAAAAGTTCATGA

Upstream 100 bases:

>100_bases
TCGGCTCATCAAGATTTTGCATAGGAATGTCCTTTTTCGTACTTTCAGTACGCATTATGGTTGAACTGAAAGTTTTTGCA
AGTGCTTTAGTATCGTACTC

Downstream 100 bases:

>100_bases
CTTCATCATCACATAGCTAGTAACCAGTACGTTTGGATGGTGGTGAGAAACACACTGCAAGCAAACAGAAACATGGATAT
TAAAATATTAGCTTAACACA

Product: repressor protein of bacteriophage origin

Products: NA

Alternate protein names: Repressor CI Bacteriophage Origin; Transciptional Regulator; Prophage Repressor; Transcriptional Regulator; Cro/CI Family Transcriptional Regulator; APSE-2 Prophage; Partial Represssor R; Peptidase; LexA Repressor

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MVQNEKVRKEFAQRLAQACKEAGLDEHGRGMAIARALSLSSKGVSKWFNAESLPRQEKMNALAKFLNVDVVWLQHGTSLN
GANDEDTFSIVGKLKKGLVRVVGEAILGVDGAIEMTEERDGWLKIYSDDPDAFGLRVKGDSMWPRIKSGEYVLIEPNTKV
FPGDEVFVRTIEGHNMIKVLGYDRDGEYQFTSINQDHRPITLPYHQVAKVEYVAGILKQSRHLDDIEAREWLKSS

Sequences:

>Translated_235_residues
MVQNEKVRKEFAQRLAQACKEAGLDEHGRGMAIARALSLSSKGVSKWFNAESLPRQEKMNALAKFLNVDVVWLQHGTSLN
GANDEDTFSIVGKLKKGLVRVVGEAILGVDGAIEMTEERDGWLKIYSDDPDAFGLRVKGDSMWPRIKSGEYVLIEPNTKV
FPGDEVFVRTIEGHNMIKVLGYDRDGEYQFTSINQDHRPITLPYHQVAKVEYVAGILKQSRHLDDIEAREWLKSS
>Mature_235_residues
MVQNEKVRKEFAQRLAQACKEAGLDEHGRGMAIARALSLSSKGVSKWFNAESLPRQEKMNALAKFLNVDVVWLQHGTSLN
GANDEDTFSIVGKLKKGLVRVVGEAILGVDGAIEMTEERDGWLKIYSDDPDAFGLRVKGDSMWPRIKSGEYVLIEPNTKV
FPGDEVFVRTIEGHNMIKVLGYDRDGEYQFTSINQDHRPITLPYHQVAKVEYVAGILKQSRHLDDIEAREWLKSS

Specific function: Unknown

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26460; Mature: 26460

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQNEKVRKEFAQRLAQACKEAGLDEHGRGMAIARALSLSSKGVSKWFNAESLPRQEKMN
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCHHHHHH
ALAKFLNVDVVWLQHGTSLNGANDEDTFSIVGKLKKGLVRVVGEAILGVDGAIEMTEERD
HHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
GWLKIYSDDPDAFGLRVKGDSMWPRIKSGEYVLIEPNTKVFPGDEVFVRTIEGHNMIKVL
CEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEECCCCCEEEEEECCCCEEEEE
GYDRDGEYQFTSINQDHRPITLPYHQVAKVEYVAGILKQSRHLDDIEAREWLKSS
ECCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure
MVQNEKVRKEFAQRLAQACKEAGLDEHGRGMAIARALSLSSKGVSKWFNAESLPRQEKMN
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCCHHHHHH
ALAKFLNVDVVWLQHGTSLNGANDEDTFSIVGKLKKGLVRVVGEAILGVDGAIEMTEERD
HHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
GWLKIYSDDPDAFGLRVKGDSMWPRIKSGEYVLIEPNTKVFPGDEVFVRTIEGHNMIKVL
CEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEECCCCEECCCCCEEEEEECCCCEEEEE
GYDRDGEYQFTSINQDHRPITLPYHQVAKVEYVAGILKQSRHLDDIEAREWLKSS
ECCCCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA