Click here to switch to the map view.

The map label for this gene is ymfA [H]

Identifier: 218704533

GI number: 218704533

Start: 1347672

End: 1348133

Strand: Reverse

Name: ymfA [H]

Synonym: ECUMN_1300

Alternate gene names: 218704533

Gene position: 1348133-1347672 (Counterclockwise)

Preceding gene: 218704534

Following gene: 218704532

Centisome position: 25.92

GC content: 42.86

Gene sequence:

>462_bases
ATGAGTCAGGACAGTAAAGTTTTCTTTCGTATATTCCTCGGTATCGGTCTGGTACTGATCCTCATTTCTGTTGTTATCTT
TTATAACCAGTTCACCTATAGCAAAGACGCGATTCATACTGAAGGCGTCATTGTTGATACCGTCTGGCACTCCAGTCATT
CTCATCGCACGGGTAAAAATGGTTCGTGGTATCCCGTCGTTGCCTTTCGACCGACGCCTGATTACACGCTAATTTTCAAT
TCGAGTATCGGCAGCGATTTTTATGAAGACAGCGAAGGCGATAAAGTTAATGTTTATTATTCTCCAGGGCATCCTGAAAA
GGCTGAGATAAATAACCCGTGGGTTAATTTTTTTAAATGGGGGTTTATCGGCATTATGGGCGTTATTTTTATCGCCGTCG
GTTTATTAATCAGTATGCCCTCCTCTAAAAAGTCACGCAGGAAACGGAAGTCCCGTCCATGA

Upstream 100 bases:

>100_bases
CATTTATGAAGAGTATTATCAGAAGCTGAAAGCAGGACGTTAATTCAGCAAGCGGGCGGTGGTATTACCGCCCGTTTTTT
ATTTAGCAAGGATGTGGCTA

Downstream 100 bases:

>100_bases
AAAAAATCATAATACTGCTCAGTTTACTGATACTGCTGCCTCTGACAGCAACCAGTAAGCCCTTAATCCCAATAATGAAG
ACACTTTTTACGGATGTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSQDSKVFFRIFLGIGLVLILISVVIFYNQFTYSKDAIHTEGVIVDTVWHSSHSHRTGKNGSWYPVVAFRPTPDYTLIFN
SSIGSDFYEDSEGDKVNVYYSPGHPEKAEINNPWVNFFKWGFIGIMGVIFIAVGLLISMPSSKKSRRKRKSRP

Sequences:

>Translated_153_residues
MSQDSKVFFRIFLGIGLVLILISVVIFYNQFTYSKDAIHTEGVIVDTVWHSSHSHRTGKNGSWYPVVAFRPTPDYTLIFN
SSIGSDFYEDSEGDKVNVYYSPGHPEKAEINNPWVNFFKWGFIGIMGVIFIAVGLLISMPSSKKSRRKRKSRP
>Mature_152_residues
SQDSKVFFRIFLGIGLVLILISVVIFYNQFTYSKDAIHTEGVIVDTVWHSSHSHRTGKNGSWYPVVAFRPTPDYTLIFNS
SIGSDFYEDSEGDKVNVYYSPGHPEKAEINNPWVNFFKWGFIGIMGVIFIAVGLLISMPSSKKSRRKRKSRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081835, Length=153, Percent_Identity=98.6928104575163, Blast_Score=309, Evalue=5e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021994 [H]

Pfam domain/function: PF12158 DUF3592 [H]

EC number: NA

Molecular weight: Translated: 17429; Mature: 17298

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQDSKVFFRIFLGIGLVLILISVVIFYNQFTYSKDAIHTEGVIVDTVWHSSHSHRTGKN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
GSWYPVVAFRPTPDYTLIFNSSIGSDFYEDSEGDKVNVYYSPGHPEKAEINNPWVNFFKW
CCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH
GFIGIMGVIFIAVGLLISMPSSKKSRRKRKSRP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
SQDSKVFFRIFLGIGLVLILISVVIFYNQFTYSKDAIHTEGVIVDTVWHSSHSHRTGKN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCC
GSWYPVVAFRPTPDYTLIFNSSIGSDFYEDSEGDKVNVYYSPGHPEKAEINNPWVNFFKW
CCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHH
GFIGIMGVIFIAVGLLISMPSSKKSRRKRKSRP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]