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The map label for this gene is csgF [H]

Identifier: 218704446

GI number: 218704446

Start: 1266611

End: 1267027

Strand: Reverse

Name: csgF [H]

Synonym: ECUMN_1212

Alternate gene names: 218704446

Gene position: 1267027-1266611 (Counterclockwise)

Preceding gene: 218704447

Following gene: 218704445

Centisome position: 24.36

GC content: 41.97

Gene sequence:

>417_bases
ATGCGTGTCAAACATGCAGTAGTTCTACTCATGCTTATTTCGCCATTAAGTTGGGCTGGAACCATGACTTTTCAGTTCCG
TAATCCAAACTTTGGTGGTAACCCAAATAATGGCGCTTTTTTATTAAATAGCGCCCAGGCACAAAACTCGTATAAAGATC
CGAGCTATAACGATGACTATGGTATTGAAACACCCTCAGCGTTAGATAACTTTACTCAGGCCATCCAGTCACAAATTTTA
GGTGGGCTACTGTCGAATATTAATACCGGTAAACCGGGCCGCATGGTGACCAACGATTATATTGTTGATATTGCTAACCG
CGATGGTCAATTGCAGTTGAACGTGACAGATCGTAAAACCGGACAAACCTCGACCATCCAGGTTTCGGGTTTACAAAATA
ACTCAACCGATTTTTAA

Upstream 100 bases:

>100_bases
TGAAGAAGCACTAAATCGTCGCCAGATAAATCAGGCGTTATTAAGTACGGGCGATTTGGCGCATGATGAATTCTAAATAA
AAAATTGTTCGGAGGCTGCA

Downstream 100 bases:

>100_bases
GCCCCAGCTTCATAAGGAAAATAATCATGCAGCGCTTATTTCTTTTGGTTGCCGTCATGTTACTGAGCGGATGCTTAACC
GCCCCGCCTAAAGAAGCCGC

Product: curli assembly protein CsgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDYGIETPSALDNFTQAIQSQIL
GGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF

Sequences:

>Translated_138_residues
MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDYGIETPSALDNFTQAIQSQIL
GGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF
>Mature_138_residues
MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDYGIETPSALDNFTQAIQSQIL
GGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKTGQTSTIQVSGLQNNSTDF

Specific function: May be involved in the biogenesis of curli organelles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787275, Length=138, Percent_Identity=99.2753623188406, Blast_Score=279, Evalue=5e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018893 [H]

Pfam domain/function: PF10614 Tafi-CsgF [H]

EC number: NA

Molecular weight: Translated: 15072; Mature: 15072

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDY
CCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
GIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKT
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEECCCCEEEEEECCCCC
GQTSTIQVSGLQNNSTDF
CCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MRVKHAVVLLMLISPLSWAGTMTFQFRNPNFGGNPNNGAFLLNSAQAQNSYKDPSYNDDY
CCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
GIETPSALDNFTQAIQSQILGGLLSNINTGKPGRMVTNDYIVDIANRDGQLQLNVTDRKT
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEEEECCCCEEEEEECCCCC
GQTSTIQVSGLQNNSTDF
CCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]