Click here to switch to the map view.

The map label for this gene is yfdH [H]

Identifier: 218704148

GI number: 218704148

Start: 952072

End: 953001

Strand: Reverse

Name: yfdH [H]

Synonym: ECUMN_0913

Alternate gene names: 218704148

Gene position: 953001-952072 (Counterclockwise)

Preceding gene: 218704149

Following gene: 218704147

Centisome position: 18.32

GC content: 43.87

Gene sequence:

>930_bases
ATGAAAATTTCTTTAGTCGTTCCGGTCTTTAACGAAGAGGCCACGATACCTATTTTTTATAAAACCGTGCGCGAATTTGA
AGGGCTTCAGCAGCATGAAGTCGAGATAGTCTTCATAAACGATGGCAGCAAAGACGCTACAGAATCAATTATCAACGAGC
TTGCTGTTGCCGACCCGCTTGTGGTTTCGCTGTCGTTCACACGTAACTTCGGCAAAGAACCCGCCCTGTTCGCAGGTCTG
GACCATGCTACCGGGGAGGCAATTATCCCGATTGACGTTGATCTGCAAGACCCTATCGAAGTTATTCCTCACTTGATAGA
GAAATGGCAGGCCGGTGCAGATATGGTTCTGGCTAAACGCTCTGACCGCTCCACTGACAGCAGGCTGAAGCGTAAATCTG
CTGAGTGGTTCTATAAACTTCATAACAAAATCAGCAACCCTCAGATAGAAGAGAATGTTGGCGACTTCCGGCTCATGTCT
CGCGAAGTAGTAGAAAATATTAAGCTCATGCCAGAACGAAACCTGTTTATGAAGGGTGTGCTGAGCTGGGTTGGTGGTCG
AACCGATGTCGTAGAATATGCGCGAGCAGAACGCGTTGCAGGAAGCACAAAGTTCAATGGATGGAAGCTATGGAACTTGG
CGCTGGAAGGGATCACTAGCTTCTCAACATTCCCGCTTCGCATGTGGACCTATATTGGGTTATTTATTGCATGTATATCA
TTTACATACGGTTCATGGATGATAATTGATAAATTAATTTTTGGTAATAATGTACCTGGATACCCTTCAATTCTTGTATC
AATATTGTTTCTTGGCGGCGTACAACTAATTGGTATTGGTGTACTTGGAGAGTACATAGGACGTATTTATATTGAAGTTA
AGCAGCGCCCAAGATATGTTTTAAAGGATCAGAAAAATGATTGCAAATAA

Upstream 100 bases:

>100_bases
GATGCGCACTTCCCCCGATGATAACTCTTGTCACCTTCTCCGCCATCAGCCTGGTGTGCGGTTTCGTCTATTCAAAGTTC
ATTGTCTTTAGGGATGCGAA

Downstream 100 bases:

>100_bases
AAACAAAACACCTTTCCATTGGTTCTTGATATCTGTTTTTATATATTTCACCCCCATCATCATGGCAAATATTCATTATG
TAGATGATCAGGGAAGAGCT

Product: bactoprenol glucosyl transferase; CPS-53 (KpLE1) prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKISLVVPVFNEEATIPIFYKTVREFEGLQQHEVEIVFINDGSKDATESIINELAVADPLVVSLSFTRNFGKEPALFAGL
DHATGEAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDSRLKRKSAEWFYKLHNKISNPQIEENVGDFRLMS
REVVENIKLMPERNLFMKGVLSWVGGRTDVVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLFIACIS
FTYGSWMIIDKLIFGNNVPGYPSILVSILFLGGVQLIGIGVLGEYIGRIYIEVKQRPRYVLKDQKNDCK

Sequences:

>Translated_309_residues
MKISLVVPVFNEEATIPIFYKTVREFEGLQQHEVEIVFINDGSKDATESIINELAVADPLVVSLSFTRNFGKEPALFAGL
DHATGEAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDSRLKRKSAEWFYKLHNKISNPQIEENVGDFRLMS
REVVENIKLMPERNLFMKGVLSWVGGRTDVVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLFIACIS
FTYGSWMIIDKLIFGNNVPGYPSILVSILFLGGVQLIGIGVLGEYIGRIYIEVKQRPRYVLKDQKNDCK
>Mature_309_residues
MKISLVVPVFNEEATIPIFYKTVREFEGLQQHEVEIVFINDGSKDATESIINELAVADPLVVSLSFTRNFGKEPALFAGL
DHATGEAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDSRLKRKSAEWFYKLHNKISNPQIEENVGDFRLMS
REVVENIKLMPERNLFMKGVLSWVGGRTDVVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLFIACIS
FTYGSWMIIDKLIFGNNVPGYPSILVSILFLGGVQLIGIGVLGEYIGRIYIEVKQRPRYVLKDQKNDCK

Specific function: Involved in O antigen modification. Catalyzes the transfer of the glucose residue from UDP-glucose to a lipid carrier [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=306, Percent_Identity=85.2941176470588, Blast_Score=550, Evalue=1e-158,
Organism=Escherichia coli, GI1788588, Length=317, Percent_Identity=34.7003154574132, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 35010; Mature: 35010

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISLVVPVFNEEATIPIFYKTVREFEGLQQHEVEIVFINDGSKDATESIINELAVADPL
CEEEEEEEECCCCCCCHHHHHHHHHHCCHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCE
VVSLSFTRNFGKEPALFAGLDHATGEAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR
EEEEEEHHCCCCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEC
SDRSTDSRLKRKSAEWFYKLHNKISNPQIEENVGDFRLMSREVVENIKLMPERNLFMKGV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
LSWVGGRTDVVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLFIACIS
HHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FTYGSWMIIDKLIFGNNVPGYPSILVSILFLGGVQLIGIGVLGEYIGRIYIEVKQRPRYV
HHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCEE
LKDQKNDCK
ECCCCCCCC
>Mature Secondary Structure
MKISLVVPVFNEEATIPIFYKTVREFEGLQQHEVEIVFINDGSKDATESIINELAVADPL
CEEEEEEEECCCCCCCHHHHHHHHHHCCHHHCCEEEEEEECCCCHHHHHHHHHHHHCCCE
VVSLSFTRNFGKEPALFAGLDHATGEAIIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKR
EEEEEEHHCCCCCCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEC
SDRSTDSRLKRKSAEWFYKLHNKISNPQIEENVGDFRLMSREVVENIKLMPERNLFMKGV
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHH
LSWVGGRTDVVEYARAERVAGSTKFNGWKLWNLALEGITSFSTFPLRMWTYIGLFIACIS
HHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FTYGSWMIIDKLIFGNNVPGYPSILVSILFLGGVQLIGIGVLGEYIGRIYIEVKQRPRYV
HHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCCCEE
LKDQKNDCK
ECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]