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The map label for this gene is ybeQ [H]

Identifier: 218703978

GI number: 218703978

Start: 789075

End: 790052

Strand: Reverse

Name: ybeQ [H]

Synonym: ECUMN_0738

Alternate gene names: 218703978

Gene position: 790052-789075 (Counterclockwise)

Preceding gene: 218703981

Following gene: 218703976

Centisome position: 15.19

GC content: 47.14

Gene sequence:

>978_bases
ATGATTTTTACGTCAAGTTGCTGCGATAATTTATCAATAGATGAGATTATCGAACGTGCTGAAAAAGGCGATTGCGATGC
TCAATATATTATTGGGTTTTATTATAATCGCGATAGCGCAATTGACTCTCCGGACGACGAAAAGGCCTTTTACTGGCTGA
GGCTGGCCGCTGAGCAAGGTCATTGTGAAGCACAATATTCCTTAGGGCAAAAGTATACCGAGGATAAAAGCCGTCATAAA
GATAATGGGCAAGCCATCTTTTGGCTGAAAAAAGCTGCCCTACAAGGCCATACTTTCGCTTCCAACGCCCTTGGCTGGAC
ACTGGATCGTGGAGAAGACCCCAACTATAAAGAAGCGGTTGCCTGGTATCAGATAGCCGCGGAGAGCGGAATGTCTTATG
CGCAAAATAATCTTGGGTGGATGTACAGAAATGGCAACGGAGTCGCACAAGACTATACGCTGGCATTTTTCTGGTACAAA
CAAGCTGCATTACAAGGCCATAGTGACGCGCAAAACAATCTGGCCGATCTTTATGAAGACGGAAAAGGCGTTGCTCAAAA
CGAGACACTCGCCGCATTCTGGTATTTGAAAAGCGCACAGCAGGGTAATCGGCATGCCCAGTTTCAAATTGCATGGGATT
ATAACGCTGGCGAAGGGGTGGACCAGGACTATAAGCAAGCCATGTACTGGTATCTGAAGGCTGCCGCTCAGGGGAGCGTC
GGCGCTTACGTCAACATCGGTTATATGTATAAACACGGACAAGGCGTTGAGAAAGATTATCAGGCCGCCTTTGAATGGTT
TACGAAAGCCGCTGAATGCAATGACGCCACTGCCTGGTATAACCTGGCCATTATGTATCACTACGGAGAAGGAAGACCTG
TCGATCTCCGACAGGCTCTCGACCTGTATCGTAAAGTTCAGGCATCCGGTACCAGGGATGTCAGTCAAGAAATCCGTGAG
ATTGAAGATTTACTGTAA

Upstream 100 bases:

>100_bases
ACTTTTCTGACGCAACATAATACGCATAAAATAAGGCTTACGCAAAAATGGAACACATAAAAATATAATATGCTTTATAT
GCAACCATAAGGAAATGATA

Downstream 100 bases:

>100_bases
GAGATAAAAACAAGGGCCGGGGAATTTTATTCGGCCCATATTCTCTTTATTGCTGTGCGAAATCATACCATTAAGGCTCG
AACGGGCGTCTCTGGAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIFTSSCCDNLSIDEIIERAEKGDCDAQYIIGFYYNRDSAIDSPDDEKAFYWLRLAAEQGHCEAQYSLGQKYTEDKSRHK
DNGQAIFWLKKAALQGHTFASNALGWTLDRGEDPNYKEAVAWYQIAAESGMSYAQNNLGWMYRNGNGVAQDYTLAFFWYK
QAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSV
GAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQASGTRDVSQEIRE
IEDLL

Sequences:

>Translated_325_residues
MIFTSSCCDNLSIDEIIERAEKGDCDAQYIIGFYYNRDSAIDSPDDEKAFYWLRLAAEQGHCEAQYSLGQKYTEDKSRHK
DNGQAIFWLKKAALQGHTFASNALGWTLDRGEDPNYKEAVAWYQIAAESGMSYAQNNLGWMYRNGNGVAQDYTLAFFWYK
QAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSV
GAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQASGTRDVSQEIRE
IEDLL
>Mature_325_residues
MIFTSSCCDNLSIDEIIERAEKGDCDAQYIIGFYYNRDSAIDSPDDEKAFYWLRLAAEQGHCEAQYSLGQKYTEDKSRHK
DNGQAIFWLKKAALQGHTFASNALGWTLDRGEDPNYKEAVAWYQIAAESGMSYAQNNLGWMYRNGNGVAQDYTLAFFWYK
QAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSV
GAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQASGTRDVSQEIRE
IEDLL

Specific function: Unknown

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybeT [H]

Homologues:

Organism=Homo sapiens, GI19923669, Length=324, Percent_Identity=30.5555555555556, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI151301150, Length=302, Percent_Identity=29.1390728476821, Blast_Score=98, Evalue=8e-21,
Organism=Homo sapiens, GI217330658, Length=191, Percent_Identity=28.7958115183246, Blast_Score=65, Evalue=8e-11,
Organism=Homo sapiens, GI217330656, Length=191, Percent_Identity=28.7958115183246, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI87081769, Length=325, Percent_Identity=96.6153846153846, Blast_Score=651, Evalue=0.0,
Organism=Escherichia coli, GI1786867, Length=126, Percent_Identity=35.7142857142857, Blast_Score=73, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17563256, Length=317, Percent_Identity=25.8675078864353, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6319410, Length=275, Percent_Identity=30.1818181818182, Blast_Score=90, Evalue=6e-19,
Organism=Drosophila melanogaster, GI21355295, Length=311, Percent_Identity=29.2604501607717, Blast_Score=105, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 37030; Mature: 37030

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFTSSCCDNLSIDEIIERAEKGDCDAQYIIGFYYNRDSAIDSPDDEKAFYWLRLAAEQG
CEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCC
HCEAQYSLGQKYTEDKSRHKDNGQAIFWLKKAALQGHTFASNALGWTLDRGEDPNYKEAV
CCHHHHHHCCHHHHHHHCCCCCCCEEEEEEEHHHCCCCCCCCCCCEEECCCCCCCHHHHH
AWYQIAAESGMSYAQNNLGWMYRNGNGVAQDYTLAFFWYKQAALQGHSDAQNNLADLYED
HHHHHHHHHCCHHHHCCCCEEEECCCCCCCHHEEEEHHHHHHHHCCCCCHHHHHHHHHHC
GKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSV
CCCCCCCCEEEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
GAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQAL
CEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHH
DLYRKVQASGTRDVSQEIREIEDLL
HHHHHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIFTSSCCDNLSIDEIIERAEKGDCDAQYIIGFYYNRDSAIDSPDDEKAFYWLRLAAEQG
CEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCEEEEEEEECCCC
HCEAQYSLGQKYTEDKSRHKDNGQAIFWLKKAALQGHTFASNALGWTLDRGEDPNYKEAV
CCHHHHHHCCHHHHHHHCCCCCCCEEEEEEEHHHCCCCCCCCCCCEEECCCCCCCHHHHH
AWYQIAAESGMSYAQNNLGWMYRNGNGVAQDYTLAFFWYKQAALQGHSDAQNNLADLYED
HHHHHHHHHCCHHHHCCCCEEEECCCCCCCHHEEEEHHHHHHHHCCCCCHHHHHHHHHHC
GKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSV
CCCCCCCCEEEEEEEEHHHCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
GAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQAL
CEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCHHHHH
DLYRKVQASGTRDVSQEIREIEDLL
HHHHHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]