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The map label for this gene is clpV1 [H]

Identifier: 218703471

GI number: 218703471

Start: 249130

End: 251862

Strand: Reverse

Name: clpV1 [H]

Synonym: ECUMN_0219

Alternate gene names: 218703471

Gene position: 251862-249130 (Counterclockwise)

Preceding gene: 218703472

Following gene: 218703470

Centisome position: 4.84

GC content: 58.14

Gene sequence:

>2733_bases
ATGATCCAGATTGATTTAGCCACGCTGGTAAAGCGGCTTAACCCCTTTGCAAAACAGGCGCTGGAAATGGCTGCCTCGGA
GTGTATGAGCCAGCAGGCCAGTGAGATCACCGTTGCCCATATGCTGTTGCAGATGCTGGTTATCCCGCGCAGCGACGTAA
GGGTGATTGCCGAACGCACAGGCATCAGTGCGGAGGATTTACGCCAGGCGCTGACCGTGGAGAGTTATCCCGGCGGACGT
TCCGCCGAAGGCTATCCCAGCTTCTCCCCGATGCTGATCGAATGGCTCAAGGAGTCATGGCTGCTGGCCTCAGCCCAGAT
GCAGCACAGCGAACTGCGCAGCGGCGTCCTGCTGCTTACTCTGCTGCATTCACCGCTGCGCTATATTCCACCCGCTGCTG
CCCGTCTGCTGACGGCCATAAACCGTGACCAGTTACAGCAGGATTTCACCGCATGGACAAAAGAATCCGCCGAATCCGTG
GATCTGGCTGGTGGGCAAGCGTTCCGTGCAACAGAAACCGGCGACACCCTGCTTGCCCGCTATGCCAAAAATATGACCGA
AGACGCCCGTAACGGAAAACTCGATCCGGTACTGTGCCGCGACCACGAAATCGATTTGATGATCGACATTCTCTGCCGCC
GTCGTAAAAATAACCCGGTGGTAGTGGGCGAAGCGGGCGTGGGCAAAAGCGCACTGATTGAAGGGCTGGCGCTGCGCATC
GTGGCAGGCCAGGTGCCGGACAAGCTGAAAAACACCGATATCATGACCCTTGACCTGGGCGCATTGCAGGCCGGAGCGTC
GGTGAAGGGCGAATTCGAAAAACGTTTCAAAGGGCTGATGGCGGAGGTCATTTCCTCCCCGGTGCCGATCATTCTGTTTA
TCGACGAAGCGCATACCCTGATTGGCGCGGGCAACCAGCAGGGCGGGCTGGATATCTCCAACCTGCTCAAACCGGCGCTG
GCGCGTGGCGAACTGAAAACCATCGCCGCCACAACCTGGAGCGAATACAAAAAATACTTCGAAAAAGACGCTGCCTTATC
GCGCCGCTTCCAGTTAGTTAAGGTCAGCGAACCTAACGCTGCCGAAGCGACGATTATTCTGCGTGGCCTGTCGGCGGTCT
ATGAACAGTCTCACGGTGTGCTGATTGACGATGAGGCCTTACAAGCCGCAGCAACACTGAGCGAGCGTTATCTCTCCGGA
CGTCAGTTGCCGGACAAAGCGATTGATGTGCTGGACACCGCCTGCGCCCGCGTGGCAATCAACCTTTCTTCGCCGCCGAA
ACAGATTTCGGCGCTGGCCACGTTAAGCCAGCAGCAGGAGACGGAAATCCGCCAGCTTGAGCGCGAAAGGCGTATCGGGC
TGCGTACCGATACCGCCCGGATGACGGAAGTGCTGGTGCAGTACGATGAAACACTGACGGCGCTGGATGAACTGGAAGCC
GCCTGGCACCAGCAACAGGCGCTGGTACAGGAGATTATTACGCTACGCCAGCAGTTACTGGGCGTTGCAGAGGACACAGA
TGCCGTAGTGGATACGCCGCCAGAGTCAGAACAGGATAATACTGGTGCCATACCGGCTGATGAAGCTGGCAGCGTACAGC
CGGAAGAGACCGCTGAAACAGTTTCCCCGGTACAGCGGCTGGCACAGCTTACTGCCGAACTGGACGCCCTGCATAACGAT
CGGTTGCTGGTCTCTCCGCATGTCGATAAAAAACAGATTGCGGCGGTAATTGCCGAATGGACTGGTGTTCCGCTTAACCG
CCTGTCGCAGAATGAAATGTCGGTCATCACCGACCTGCCGAAGTGGCTTGGTGACACCATCAAAGGCCAGGACCTGGCGA
TTGCCAGCCTGCATAAACACCTGCTGACCGCACGCGCCGACCTGCGCCGTCCGGGACGCCCGCTTGGCGCGTTTCTGCTG
GCTGGTCCCAGTGGCGTGGGTAAAACCGAAACCGTCCTGCAACTGGCAGAGCTGCTCTACGGCGGTCGCCAGTACCTGAC
CACCATCAATATGTCCGAGTTCCAGGAGAAGCACACCGTCTCGCGGCTGATTGGTTCCCCTCCGGGCTATGTCGGCTATG
GCGAAGGCGGCGTGCTGACTGAGGCCATCCGCCAGAAACCCTACTCGGTGGTACTTCTCGATGAAGTGGAAAAAGCGCAC
CCGGATGTGCTCAACCTGTTCTACCAGGCGTTTGACAAGGGCGAGATGGCGGACGGCGAGGGCCGCCTGATTGACTGTAA
AAACATCGTCTTCTTCCTCACCTCCAACCTCGGCTATCAGGTGATTGTCGAACACGCCGATGACCCGGAAACCATGCAGG
AAGCCCTGTATCCGGTGCTGGCAGACTTCTTTAAACCCGCCCTGCTGGCGCGTATGGAAGTGGTGCCATACCTGCCGCTG
TCGAAAGCGACGCTCGCTACCATTATTGCCGGGAAACTGGCCCGCCTGGATAACGTGCTGCGCAGCCGCTTTGGTGCGGA
CGTGATTATTGAACCGGAAGTGACGGACGAAATCATGAGCCGCGTCACCCGCGCGGAAAACGGCGCGAGGATGCTCGAAT
CGGTCATTGACGGCGACATGCTGCCGCCGCTCTCGCTGCTGCTGTTGCAGAAAATGGCGGCTAACACGGCGATTGCCCGG
ATTCGCCTGTCGGTGGCAGACGGTGCATTCACAGCAGACGTGGAAGATGTTCTGAACGACGAGTCCGTCACAGAGGATGA
AACGGTTTTATGA

Upstream 100 bases:

>100_bases
TGTGCTGGCCGTATTTTATCTGTTTTATCTGCTGCGTCTGGACAGCCAGACACAGGATATTCTGCATCAGCTCAATAAAT
TACTCCGATAAGGACATCTT

Downstream 100 bases:

>100_bases
GCAGGTTGCGCGTTTTCCTGCAGACAGGATGGTTTATCGCGGGCCTGATGGCGGGCTTACCCGCCAGTGCCGCGCCCGCA
GAAACATCGTCAATGGCCGG

Product: putative ATP-dependent Clp proteinase Aec27 ATP-binding chain, with chaperone activity

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 910; Mature: 910

Protein sequence:

>910_residues
MIQIDLATLVKRLNPFAKQALEMAASECMSQQASEITVAHMLLQMLVIPRSDVRVIAERTGISAEDLRQALTVESYPGGR
SAEGYPSFSPMLIEWLKESWLLASAQMQHSELRSGVLLLTLLHSPLRYIPPAAARLLTAINRDQLQQDFTAWTKESAESV
DLAGGQAFRATETGDTLLARYAKNMTEDARNGKLDPVLCRDHEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRI
VAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVISSPVPIILFIDEAHTLIGAGNQQGGLDISNLLKPAL
ARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNAAEATIILRGLSAVYEQSHGVLIDDEALQAAATLSERYLSG
RQLPDKAIDVLDTACARVAINLSSPPKQISALATLSQQQETEIRQLERERRIGLRTDTARMTEVLVQYDETLTALDELEA
AWHQQQALVQEIITLRQQLLGVAEDTDAVVDTPPESEQDNTGAIPADEAGSVQPEETAETVSPVQRLAQLTAELDALHND
RLLVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLPKWLGDTIKGQDLAIASLHKHLLTARADLRRPGRPLGAFLL
AGPSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAH
PDVLNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQVIVEHADDPETMQEALYPVLADFFKPALLARMEVVPYLPL
SKATLATIIAGKLARLDNVLRSRFGADVIIEPEVTDEIMSRVTRAENGARMLESVIDGDMLPPLSLLLLQKMAANTAIAR
IRLSVADGAFTADVEDVLNDESVTEDETVL

Sequences:

>Translated_910_residues
MIQIDLATLVKRLNPFAKQALEMAASECMSQQASEITVAHMLLQMLVIPRSDVRVIAERTGISAEDLRQALTVESYPGGR
SAEGYPSFSPMLIEWLKESWLLASAQMQHSELRSGVLLLTLLHSPLRYIPPAAARLLTAINRDQLQQDFTAWTKESAESV
DLAGGQAFRATETGDTLLARYAKNMTEDARNGKLDPVLCRDHEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRI
VAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVISSPVPIILFIDEAHTLIGAGNQQGGLDISNLLKPAL
ARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNAAEATIILRGLSAVYEQSHGVLIDDEALQAAATLSERYLSG
RQLPDKAIDVLDTACARVAINLSSPPKQISALATLSQQQETEIRQLERERRIGLRTDTARMTEVLVQYDETLTALDELEA
AWHQQQALVQEIITLRQQLLGVAEDTDAVVDTPPESEQDNTGAIPADEAGSVQPEETAETVSPVQRLAQLTAELDALHND
RLLVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLPKWLGDTIKGQDLAIASLHKHLLTARADLRRPGRPLGAFLL
AGPSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAH
PDVLNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQVIVEHADDPETMQEALYPVLADFFKPALLARMEVVPYLPL
SKATLATIIAGKLARLDNVLRSRFGADVIIEPEVTDEIMSRVTRAENGARMLESVIDGDMLPPLSLLLLQKMAANTAIAR
IRLSVADGAFTADVEDVLNDESVTEDETVL
>Mature_910_residues
MIQIDLATLVKRLNPFAKQALEMAASECMSQQASEITVAHMLLQMLVIPRSDVRVIAERTGISAEDLRQALTVESYPGGR
SAEGYPSFSPMLIEWLKESWLLASAQMQHSELRSGVLLLTLLHSPLRYIPPAAARLLTAINRDQLQQDFTAWTKESAESV
DLAGGQAFRATETGDTLLARYAKNMTEDARNGKLDPVLCRDHEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRI
VAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVISSPVPIILFIDEAHTLIGAGNQQGGLDISNLLKPAL
ARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNAAEATIILRGLSAVYEQSHGVLIDDEALQAAATLSERYLSG
RQLPDKAIDVLDTACARVAINLSSPPKQISALATLSQQQETEIRQLERERRIGLRTDTARMTEVLVQYDETLTALDELEA
AWHQQQALVQEIITLRQQLLGVAEDTDAVVDTPPESEQDNTGAIPADEAGSVQPEETAETVSPVQRLAQLTAELDALHND
RLLVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLPKWLGDTIKGQDLAIASLHKHLLTARADLRRPGRPLGAFLL
AGPSGVGKTETVLQLAELLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAH
PDVLNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQVIVEHADDPETMQEALYPVLADFFKPALLARMEVVPYLPL
SKATLATIIAGKLARLDNVLRSRFGADVIIEPEVTDEIMSRVTRAENGARMLESVIDGDMLPPLSLLLLQKMAANTAIAR
IRLSVADGAFTADVEDVLNDESVTEDETVL

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=321, Percent_Identity=31.7757009345794, Blast_Score=156, Evalue=9e-38,
Organism=Escherichia coli, GI1788943, Length=702, Percent_Identity=41.3105413105413, Blast_Score=496, Evalue=1e-141,
Organism=Escherichia coli, GI1787109, Length=312, Percent_Identity=41.025641025641, Blast_Score=239, Evalue=5e-64,
Organism=Saccharomyces cerevisiae, GI6320464, Length=719, Percent_Identity=37.6912378303199, Blast_Score=435, Evalue=1e-122,
Organism=Saccharomyces cerevisiae, GI6323002, Length=718, Percent_Identity=36.0724233983287, Blast_Score=420, Evalue=1e-118,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 99565; Mature: 99565

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: PS00870 CLPAB_1 ; PS00871 CLPAB_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQIDLATLVKRLNPFAKQALEMAASECMSQQASEITVAHMLLQMLVIPRSDVRVIAERT
CEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
GISAEDLRQALTVESYPGGRSAEGYPSFSPMLIEWLKESWLLASAQMQHSELRSGVLLLT
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHSPLRYIPPAAARLLTAINRDQLQQDFTAWTKESAESVDLAGGQAFRATETGDTLLAR
HHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHH
YAKNMTEDARNGKLDPVLCRDHEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRI
HHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH
VAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVISSPVPIILFIDEAHTL
HHCCCCHHHCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
IGAGNQQGGLDISNLLKPALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNA
HCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCC
AEATIILRGLSAVYEQSHGVLIDDEALQAAATLSERYLSGRQLPDKAIDVLDTACARVAI
CHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEE
NLSSPPKQISALATLSQQQETEIRQLERERRIGLRTDTARMTEVLVQYDETLTALDELEA
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AWHQQQALVQEIITLRQQLLGVAEDTDAVVDTPPESEQDNTGAIPADEAGSVQPEETAET
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
VSPVQRLAQLTAELDALHNDRLLVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLP
HHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
KWLGDTIKGQDLAIASLHKHLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQLAELLY
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
GGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAH
CCHHHEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHHHC
PDVLNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQVIVEHADDPETMQEALYPVL
HHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEHCCCCCEEEEEECCCCHHHHHHHHHHHH
ADFFKPALLARMEVVPYLPLSKATLATIIAGKLARLDNVLRSRFGADVIIEPEVTDEIMS
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHH
RVTRAENGARMLESVIDGDMLPPLSLLLLQKMAANTAIARIRLSVADGAFTADVEDVLND
HHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHCCC
ESVTEDETVL
CCCCCCCCCC
>Mature Secondary Structure
MIQIDLATLVKRLNPFAKQALEMAASECMSQQASEITVAHMLLQMLVIPRSDVRVIAERT
CEEEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC
GISAEDLRQALTVESYPGGRSAEGYPSFSPMLIEWLKESWLLASAQMQHSELRSGVLLLT
CCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLHSPLRYIPPAAARLLTAINRDQLQQDFTAWTKESAESVDLAGGQAFRATETGDTLLAR
HHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHH
YAKNMTEDARNGKLDPVLCRDHEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLALRI
HHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHH
VAGQVPDKLKNTDIMTLDLGALQAGASVKGEFEKRFKGLMAEVISSPVPIILFIDEAHTL
HHCCCCHHHCCCCEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHH
IGAGNQQGGLDISNLLKPALARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEPNA
HCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCC
AEATIILRGLSAVYEQSHGVLIDDEALQAAATLSERYLSGRQLPDKAIDVLDTACARVAI
CHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEE
NLSSPPKQISALATLSQQQETEIRQLERERRIGLRTDTARMTEVLVQYDETLTALDELEA
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
AWHQQQALVQEIITLRQQLLGVAEDTDAVVDTPPESEQDNTGAIPADEAGSVQPEETAET
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
VSPVQRLAQLTAELDALHNDRLLVSPHVDKKQIAAVIAEWTGVPLNRLSQNEMSVITDLP
HHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH
KWLGDTIKGQDLAIASLHKHLLTARADLRRPGRPLGAFLLAGPSGVGKTETVLQLAELLY
HHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
GGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQKPYSVVLLDEVEKAH
CCHHHEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHHHC
PDVLNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQVIVEHADDPETMQEALYPVL
HHHHHHHHHHHCCCCCCCCCCCEEECCCEEEEHCCCCCEEEEEECCCCHHHHHHHHHHHH
ADFFKPALLARMEVVPYLPLSKATLATIIAGKLARLDNVLRSRFGADVIIEPEVTDEIMS
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHH
RVTRAENGARMLESVIDGDMLPPLSLLLLQKMAANTAIARIRLSVADGAFTADVEDVLND
HHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHCCC
ESVTEDETVL
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]