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The map label for this gene is yacF [H]

Identifier: 218703360

GI number: 218703360

Start: 116422

End: 117165

Strand: Reverse

Name: yacF [H]

Synonym: ECUMN_0100

Alternate gene names: 218703360

Gene position: 117165-116422 (Counterclockwise)

Preceding gene: 218703361

Following gene: 218703336

Centisome position: 2.25

GC content: 51.34

Gene sequence:

>744_bases
ATGCAGACCCAGGTCCTTTTTGAACATCCACTAAATGAAAAAATGCGTACGTGGCTGCGCATTGAGTTTTTGATTCAGCA
ACTCACCGTTAATTTACCCATCGCTGACCACGCTGGCGCACTGCATTTCTTCCGTAATGTCAGTGAATTACTGGATGTTT
TCGAGCGTGGCGAAGTCCGCACTGAGCTGTTGAAAGAACTTGACCGGCAGCAACGTAAACTCCAGACCTGGATTGGCGTG
CCTGGCGTGGACCAGAGCCGTATTGAAGCATTAATTCAGCAGTTAAAAGCGGCGGGGAGCGTATTAATTTCCGCGCCGCG
TATCGGGCAATTTCTGCGTGAAGATCGTTTGATTGCTCTGGTGCGTCAGCGACTGAGCATCCCAGGCGGCTGTTGCAGCT
TTGATTTACCTTCATTGCACATTTGGCTGCATCTACCCCAGGCGCAGCGCGACAGCCAGGTAGAAACCTGGATTGCCAGC
CTGAACCCGCTCACCCAGGCACTTACCATGGTGCTGGATTTAATTCGCCAGTCGGCCCCCTTCCGTAAACAAACCAGCCT
GAATGGTTTTTATCAGGATAACGGTGGCGATGCCGACTTGCTGCGCCTGAATCTGTCGCTCGATTCACAGCTTTATCCGC
AAATTTCCGGTCATAAGAGCCGTTTTGCCATTCGTTTTATGCCGCTGGACAGTGAAAACGGACAGGTACCGGAACGTCTG
GATTTCGAATTGGCCTGTTGCTAA

Upstream 100 bases:

>100_bases
ATAATAACGGCGCACCGGATGCTATCGCATCGGATGTTGCCCGCCTGCACGCACACTATTTGCAGCTTGCGTCGCAGTTT
GTCTCACAGGAAAAACCGTA

Downstream 100 bases:

>100_bases
GGAGTAAAAATGTCAGAAACTATTACGGTGAATTGCCCAACCTGCGGGAAAACGGTGGTATGGGGTGAAATCAGCCCGTT
TCGGCCATTTTGCTCCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIADHAGALHFFRNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGV
PGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPSLHIWLHLPQAQRDSQVETWIAS
LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDSENGQVPERL
DFELACC

Sequences:

>Translated_247_residues
MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIADHAGALHFFRNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGV
PGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPSLHIWLHLPQAQRDSQVETWIAS
LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDSENGQVPERL
DFELACC
>Mature_247_residues
MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIADHAGALHFFRNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGV
PGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPSLHIWLHLPQAQRDSQVETWIAS
LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDSENGQVPERL
DFELACC

Specific function: Unknown

COG id: COG4582

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0289 family [H]

Homologues:

Organism=Escherichia coli, GI1786291, Length=247, Percent_Identity=98.7854251012146, Blast_Score=499, Evalue=1e-143,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009777 [H]

Pfam domain/function: PF07072 DUF1342 [H]

EC number: NA

Molecular weight: Translated: 28236; Mature: 28236

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIADHAGALHFFRNVSELLDVFERGEVR
CCCCEEHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
TELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIAL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHH
VRQRLSIPGGCCSFDLPSLHIWLHLPQAQRDSQVETWIASLNPLTQALTMVLDLIRQSAP
HHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDSENGQVPERL
CCHHCCCCCEECCCCCCEEEEEEEECCCCHHCCCCCCCCCEEEEEEEEECCCCCCCCCCC
DFELACC
CCEEECC
>Mature Secondary Structure
MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIADHAGALHFFRNVSELLDVFERGEVR
CCCCEEHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
TELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVLISAPRIGQFLREDRLIAL
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHH
VRQRLSIPGGCCSFDLPSLHIWLHLPQAQRDSQVETWIASLNPLTQALTMVLDLIRQSAP
HHHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGHKSRFAIRFMPLDSENGQVPERL
CCHHCCCCCEECCCCCCEEEEEEEECCCCHHCCCCCCCCCEEEEEEEEECCCCCCCCCCC
DFELACC
CCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA