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The map label for this gene is osmY

Identifier: 218703122

GI number: 218703122

Start: 5101852

End: 5102457

Strand: Direct

Name: osmY

Synonym: ECIAI39_4904

Alternate gene names: 218703122

Gene position: 5101852-5102457 (Clockwise)

Preceding gene: 218703121

Following gene: 218703123

Centisome position: 99.41

GC content: 51.16

Gene sequence:

>606_bases
ATGACTATGACAAGACTGAAGATTTCGAAAACTCTGCTGGCTGTAATGTTGACCTCTGCCGTCGCGACCGGCTCTGCCTA
CGCGGAAAACAACGCGCAGACTACCAATGAAAGCGCAGGGCAAAAAGTCGATAGCTCTATGAATAAAGTCGGTAATTTCA
TGGATGACAGCGCCATCACCGCGAAAGTGAAGGCGGCCCTGGTGGATCATGACAACATCAAGAGCACCGATATCTCTGTC
AAAACCGATCAAAAAGTCGTGACCCTGAGCGGTTTCGTTGAAAGCCAGGCTCAGGCCGAAGAGGCGGTGAAAGTGGCGAA
AGGTGTTGAGGGCGTGACCTCTGTCAGCGACAAACTGCACGTTCGCGACGCTAAAGAAGGCTCTGTGAAAGGCTACGCGG
GTGACACCGCCACTACCAGTGAAATCAAAGCCAAACTGCTGGCAGATGACATTGTCCCTTCCCGTCATGTGAAAGTTGAA
ACCACCGATGGCGTGGTCCAGCTCTCCGGTACCGTAGATTCTCAGGCACAGAGCGACCGTGCTGAAAGTATCGCCAAAGC
GGTAGATGGTGTGAAAAGCGTTAAAAATGATCTGAAAACTAAGTAA

Upstream 100 bases:

>100_bases
CGACCATTGACTTCTGTAGAGGGTGAAGTCTCTCCCTATTCAGCAATGCAACCTCGTGTTGCCAGGCTCAAATTACGAGC
AAACATACAGGAATAAATCG

Downstream 100 bases:

>100_bases
TTCGTCGTAATTCGACCTCCCGAACTTTGTCGGGAGGCGCGATGTGCACCACACTAAAAATATCGCATTGAGTGATTTTC
ACGCTCATATCAAGCGGTGA

Product: periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISV
KTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVE
TTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK

Sequences:

>Translated_201_residues
MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISV
KTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVE
TTDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK
>Mature_200_residues
TMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAITAKVKAALVDHDNIKSTDISVK
TDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLHVRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVET
TDGVVQLSGTVDSQAQSDRAESIAKAVDGVKSVKNDLKTK

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains

Homologues:

Organism=Escherichia coli, GI1790836, Length=201, Percent_Identity=100, Blast_Score=393, Evalue=1e-111,

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): OSMY_ECOL6 (P0AFH9)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_757303.1
- ProteinModelPortal:   P0AFH9
- EnsemblBacteria:   EBESCT00000043975
- GeneID:   1037077
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c5457
- GeneTree:   EBGT00050000010001
- HOGENOM:   HBG679957
- OMA:   VKDVDNQ
- ProtClustDB:   PRK10568
- InterPro:   IPR007055
- InterPro:   IPR014004
- SMART:   SM00749

Pfam domain/function: PF04972 BON

EC number: NA

Molecular weight: Translated: 21074; Mature: 20943

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAIT
CCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
AKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLH
HHHHHHHHCCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHE
VRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDR
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCHHHHHH
AESIAKAVDGVKSVKNDLKTK
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TMTRLKISKTLLAVMLTSAVATGSAYAENNAQTTNESAGQKVDSSMNKVGNFMDDSAIT
CCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHH
AKVKAALVDHDNIKSTDISVKTDQKVVTLSGFVESQAQAEEAVKVAKGVEGVTSVSDKLH
HHHHHHHHCCCCCCCCCEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHE
VRDAKEGSVKGYAGDTATTSEIKAKLLADDIVPSRHVKVETTDGVVQLSGTVDSQAQSDR
ECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCHHHHHH
AESIAKAVDGVKSVKNDLKTK
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157