| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
Click here to switch to the map view.
The map label for this gene is 218703112
Identifier: 218703112
GI number: 218703112
Start: 5089178
End: 5089825
Strand: Direct
Name: 218703112
Synonym: ECIAI39_4894
Alternate gene names: NA
Gene position: 5089178-5089825 (Clockwise)
Preceding gene: 218703111
Following gene: 218703113
Centisome position: 99.16
GC content: 59.57
Gene sequence:
>648_bases ATGGCAGCGACGCACACACTCCCTCTGGCGTCACCGGGCATGGCACGCATCTGCCTTTACGGGGATTTGCAACGATTTGG CCGCCGCATCGACCTTCGTGTGAAAACGGGGGCCGAAGCCATCCGGGCGCTGGCCACACAGCTCCCGGCGTTTCGTCAGA AACTGAATGACGGCTGGTATCAGGTGCGCATTGCCGGGCGTGATGCAGGTGAAACCGAATTATCTGCCCGTCTTAATGAG CCGCTGGCAAATGGTGCCGTGATCCATATCGTGCCGCGTCTGGCGGGAGCTAAAAGTGGCGGTGTGTTTCAGGTGGTGCT GGGGGCGGCGTTGATTGCGGTGGCATGGTGGAACCCTGTGGGCTGGCTGGGTGCCGCGGCTGTATCGGGCATGTATGCGG CAGGGGCCAGTATGATCCTGGGCGGTGTGGCGCAGATGCTGGCACCGAAAGCCAGGACGTCCACGGCAGCCAGTACAGAT AACGGCAAACAGAACACCTATTTTTCCTCACTGGATAACATGGTTGCTCAGGGCAATGTTTTGCCTGTTCTGTACGGTGA AATGCGTGTGGGGTCGCGGGTAGTTTCTCAGGAGATCAGCACGGCAGACGAAGGGGACGGTGGTCAGGTTGTGGTGATTG GTCGCTGA
Upstream 100 bases:
>100_bases GTTCATCGGTGCCGAATCATGCCGCTATTTACTGCGGCGACGGCGAGCTGCTGCACCATATTCCTGAACAACTGAGCAAA CGAGAGAGGTATACCGACAA
Downstream 100 bases:
>100_bases TGCAAAATGTTTTATGTGAAACCGCCTCCGGGCGGTTTTGTCGTTTATGGAGCATGACGAATGGGTAAAGGCAGCAGTAA GGGGCATACCCCGCGCGAAG
Product: tail assembly protein I from putative prophage
Products: NA
Alternate protein names: Bacteriophage Lambda Tail Assembly I; Bacteriophage Lambda Tail Assembly Protein I; Lambda Tail Assembly I; Bacteriophage Tail Protein; Tail Assembly Protein I; Phage-Related Protein Tail Component; Bacteriophage Protein; Tail Assembly Protein; Tail Assembly Protein I Prophage; Prophage LambdaSo Tail Assembly Protein I; Phage Tail Assembly Protein I; Phage Tail Component; Tail Assembly Protein I-Like; Phage Tail Protein; Gp63 Phage Protein
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLNDGWYQVRIAGRDAGETELSARLNE PLANGAVIHIVPRLAGAKSGGVFQVVLGAALIAVAWWNPVGWLGAAAVSGMYAAGASMILGGVAQMLAPKARTSTAASTD NGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR
Sequences:
>Translated_215_residues MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLNDGWYQVRIAGRDAGETELSARLNE PLANGAVIHIVPRLAGAKSGGVFQVVLGAALIAVAWWNPVGWLGAAAVSGMYAAGASMILGGVAQMLAPKARTSTAASTD NGKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR >Mature_214_residues AATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLNDGWYQVRIAGRDAGETELSARLNEP LANGAVIHIVPRLAGAKSGGVFQVVLGAALIAVAWWNPVGWLGAAAVSGMYAAGASMILGGVAQMLAPKARTSTAASTDN GKQNTYFSSLDNMVAQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR
Specific function: Unknown
COG id: COG4723
COG function: function code S; Phage-related protein, tail component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22505; Mature: 22374
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLNDGWY CCCCCCCCCCCCCCEEEEHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEE QVRIAGRDAGETELSARLNEPLANGAVIHIVPRLAGAKSGGVFQVVLGAALIAVAWWNPV EEEEECCCCCCHHHHHHHCCCCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHCCCH GWLGAAAVSGMYAAGASMILGGVAQMLAPKARTSTAASTDNGKQNTYFSSLDNMVAQGNV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE LPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR EEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEC >Mature Secondary Structure AATHTLPLASPGMARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLNDGWY CCCCCCCCCCCCCEEEEHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCEE QVRIAGRDAGETELSARLNEPLANGAVIHIVPRLAGAKSGGVFQVVLGAALIAVAWWNPV EEEEECCCCCCHHHHHHHCCCCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHCCCH GWLGAAAVSGMYAAGASMILGGVAQMLAPKARTSTAASTDNGKQNTYFSSLDNMVAQGNV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCE LPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR EEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA