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The map label for this gene is yfdM [H]

Identifier: 218703081

GI number: 218703081

Start: 5064290

End: 5064976

Strand: Direct

Name: yfdM [H]

Synonym: ECIAI39_4863

Alternate gene names: 218703081

Gene position: 5064290-5064976 (Clockwise)

Preceding gene: 218703080

Following gene: 218703082

Centisome position: 98.68

GC content: 54.15

Gene sequence:

>687_bases
GTGGTATCTGTCAGGGAATTACGTGGGGGCTTAATGAGTAATAAATATTGCCAGGAGCTGGTGGAACTGCGGAACAAACC
AGCCCATGAACTGAAGGAAGTGGGCGATCAGTGGCGCACGCCGGACAACATTTTCTGGGGAATTAACACCCTGTTTGGTC
CGTTTGTTCTGGATCTGTTCACTGACGGTGATAACGCCAAATGCGCTGCGTATTACACGGCGGAAGACAACGCGCTGGCG
CATGACTGGTCAGAACGCCTTGCGGAGCTTAAAGGTGCTGCCTTTGGAAATCCCCCATACAGCCGCGCCAGTCAGCATGA
GGGGCAATACATCACCGGCATGCGTTACATCATGAAGCATGCCAGTGCCATGCGTGATAAGGGCGGGCGCTATGTTTTCC
TGATCAAAGCTGCCACCAGCGAAGTGTGGTGGCCGGAAGATGCAGATCATATTGCTTTTATTCGCGGGCGTATTGGTTTT
GAACTGCCTGCCTGGTTTATCCCGAAGGATGAGAAGCAGGTGCCGACAGGCGCTTTCTTCGCTGGTGCTATTGCTGTTTT
CGACAAGACCTGGAAGGGACCGGCAATCAGCTATATCGGGCGCGATGAACTTGAGGCATGTGGTGAGGCGTTTCTGGCGC
AGGTTCGCCTGCAGGCGGAAAAGCTGGTCAGGGAGATGGCGGCATGA

Upstream 100 bases:

>100_bases
CATTCCGTGAAAGCCACTCCCAGCCAGAACGAAACAATTTTCTGGCGCGTCGTGAGCAGTGTTTACGGAAAAGCAGCAAG
CGCGCTGTATCGGGTGATGA

Downstream 100 bases:

>100_bases
CGACGTTAACTCAATGCCAGCAGCAGGTGCTGGATATGCTGATTTCTTATCAGAAAGAGCGTGGCTTCCCGCCAACCAAT
CAGGAGGTGGCAACCATGCT

Product: putative phage AdoMet-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MVSVRELRGGLMSNKYCQELVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALA
HDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKHASAMRDKGGRYVFLIKAATSEVWWPEDADHIAFIRGRIGF
ELPAWFIPKDEKQVPTGAFFAGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRLQAEKLVREMAA

Sequences:

>Translated_228_residues
MVSVRELRGGLMSNKYCQELVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALA
HDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKHASAMRDKGGRYVFLIKAATSEVWWPEDADHIAFIRGRIGF
ELPAWFIPKDEKQVPTGAFFAGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRLQAEKLVREMAA
>Mature_228_residues
MVSVRELRGGLMSNKYCQELVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLFTDGDNAKCAAYYTAEDNALA
HDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKHASAMRDKGGRYVFLIKAATSEVWWPEDADHIAFIRGRIGF
ELPAWFIPKDEKQVPTGAFFAGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRLQAEKLVREMAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008593 [H]

Pfam domain/function: PF05869 Dam [H]

EC number: NA

Molecular weight: Translated: 25685; Mature: 25685

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVRELRGGLMSNKYCQELVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLF
CCCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH
TDGDNAKCAAYYTAEDNALAHDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKH
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ASAMRDKGGRYVFLIKAATSEVWWPEDADHIAFIRGRIGFELPAWFIPKDEKQVPTGAFF
HHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCHHH
AGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRLQAEKLVREMAA
HHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVSVRELRGGLMSNKYCQELVELRNKPAHELKEVGDQWRTPDNIFWGINTLFGPFVLDLF
CCCHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHH
TDGDNAKCAAYYTAEDNALAHDWSERLAELKGAAFGNPPYSRASQHEGQYITGMRYIMKH
CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
ASAMRDKGGRYVFLIKAATSEVWWPEDADHIAFIRGRIGFELPAWFIPKDEKQVPTGAFF
HHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCHHH
AGAIAVFDKTWKGPAISYIGRDELEACGEAFLAQVRLQAEKLVREMAA
HHHHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 3532033 [H]