| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is 218702981
Identifier: 218702981
GI number: 218702981
Start: 4958373
End: 4959134
Strand: Direct
Name: 218702981
Synonym: ECIAI39_4752
Alternate gene names: NA
Gene position: 4958373-4959134 (Clockwise)
Preceding gene: 218702980
Following gene: 218702990
Centisome position: 96.62
GC content: 48.16
Gene sequence:
>762_bases ATGAGCAAGGAGATTTATATGAAAAAATCCTCCCGAATGTCTATTGTCCATTCTCATGCTGCGGGCGTTGATATTGGGGC CAAATTTCACGTTGTGGCCGTACCGCCTGATGCTGACGCCGAGCCAATAAGGACTTTTCAAAGTTTCACCGGCGACCTTC ATCGTATGTCTGACTGGCTCAAAACCTGTCATATTACAACCGTCGCCATGGAGTCCACCGGCGTTTACTGGTTGCCTGCT TTTGAGATCCTTGAAGCAGCGGGTTTTAATATGATACTCGTTAATGTCAGTGCCGCAAAAAATGTTCCCGGTCGCAAGAC TGATGTCAACGACGCACAGTGGTTGCAGAGACGACATGCATTTGGTCTTCTCCGGGCCAGTTTCAGACCTGTACACGACA TTTCAGTCCTCAGGTCTTATCTGAGGCAACGAGAACGCTTGACTGAATACCGGGCTGCGCATATTCAGCATATGCAGAAA GCGCTGATGCAGATGAATGTGCAATTGCATCATGCCGTATCGGATATCACTGGCGTCACCGGTCTCTCGATCGTCAGAGC TATTGTCAGCGGTGAGCCCGATCCTTCAGTATTGATCCAGTACCGTGATGTGAGATGTAAGAAGACGCCAGAAGTACTTC AGCAGGCACTGACAGGGAACTGGCAACCTGAGCATCTTTTTGCACTTGAGCAGTCGGTGGCATTTTTCTATTTTTACCAG GAAAAGATCCGTGAACGTGACGATCAAATCGAAATTCATTAA
Upstream 100 bases:
>100_bases AAAAAAACATGGTTCAGGGGCTGTGGCGGATCCGACGGTGGTAGCTTGATCCCGTTCAGGAAGGTGATTTCTCCGTCGTC TCCTCCTTCGTTCATTAAAA
Downstream 100 bases:
>100_bases TACAACTCAGCACCGGGACTGAAAATCCTGAAGGAGTATTACCCTGCGCCAGACATCGTACAAAGCAACCCAATCAGCTT TCCTTGAACCGCCCCGGGTT
Product: transposase (fragment), IS110 family
Products: NA
Alternate protein names: ISPpu9 Transposase; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives; Pyruvate Water Dikinase; ISAfe3 Transposase; Phosphoenolpyruvate Synthase; Transposase For Insertion Sequences
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSKEIYMKKSSRMSIVHSHAAGVDIGAKFHVVAVPPDADAEPIRTFQSFTGDLHRMSDWLKTCHITTVAMESTGVYWLPA FEILEAAGFNMILVNVSAAKNVPGRKTDVNDAQWLQRRHAFGLLRASFRPVHDISVLRSYLRQRERLTEYRAAHIQHMQK ALMQMNVQLHHAVSDITGVTGLSIVRAIVSGEPDPSVLIQYRDVRCKKTPEVLQQALTGNWQPEHLFALEQSVAFFYFYQ EKIRERDDQIEIH
Sequences:
>Translated_253_residues MSKEIYMKKSSRMSIVHSHAAGVDIGAKFHVVAVPPDADAEPIRTFQSFTGDLHRMSDWLKTCHITTVAMESTGVYWLPA FEILEAAGFNMILVNVSAAKNVPGRKTDVNDAQWLQRRHAFGLLRASFRPVHDISVLRSYLRQRERLTEYRAAHIQHMQK ALMQMNVQLHHAVSDITGVTGLSIVRAIVSGEPDPSVLIQYRDVRCKKTPEVLQQALTGNWQPEHLFALEQSVAFFYFYQ EKIRERDDQIEIH >Mature_252_residues SKEIYMKKSSRMSIVHSHAAGVDIGAKFHVVAVPPDADAEPIRTFQSFTGDLHRMSDWLKTCHITTVAMESTGVYWLPAF EILEAAGFNMILVNVSAAKNVPGRKTDVNDAQWLQRRHAFGLLRASFRPVHDISVLRSYLRQRERLTEYRAAHIQHMQKA LMQMNVQLHHAVSDITGVTGLSIVRAIVSGEPDPSVLIQYRDVRCKKTPEVLQQALTGNWQPEHLFALEQSVAFFYFYQE KIRERDDQIEIH
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28895; Mature: 28763
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKEIYMKKSSRMSIVHSHAAGVDIGAKFHVVAVPPDADAEPIRTFQSFTGDLHRMSDWL CCCCEEECCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH KTCHITTVAMESTGVYWLPAFEILEAAGFNMILVNVSAAKNVPGRKTDVNDAQWLQRRHA HHHHHEEEEEECCCEEEEHHHHHHHHCCCEEEEEEEEHHCCCCCCCCCCCHHHHHHHHHH FGLLRASFRPVHDISVLRSYLRQRERLTEYRAAHIQHMQKALMQMNVQLHHAVSDITGVT HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH GLSIVRAIVSGEPDPSVLIQYRDVRCKKTPEVLQQALTGNWQPEHLFALEQSVAFFYFYQ HHHHHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH EKIRERDDQIEIH HHHHCCCCCEECC >Mature Secondary Structure SKEIYMKKSSRMSIVHSHAAGVDIGAKFHVVAVPPDADAEPIRTFQSFTGDLHRMSDWL CCCEEECCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH KTCHITTVAMESTGVYWLPAFEILEAAGFNMILVNVSAAKNVPGRKTDVNDAQWLQRRHA HHHHHEEEEEECCCEEEEHHHHHHHHCCCEEEEEEEEHHCCCCCCCCCCCHHHHHHHHHH FGLLRASFRPVHDISVLRSYLRQRERLTEYRAAHIQHMQKALMQMNVQLHHAVSDITGVT HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH GLSIVRAIVSGEPDPSVLIQYRDVRCKKTPEVLQQALTGNWQPEHLFALEQSVAFFYFYQ HHHHHHHHHCCCCCHHEEEEEECCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH EKIRERDDQIEIH HHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA