Click here to switch to the map view.

The map label for this gene is tia

Identifier: 218702831

GI number: 218702831

Start: 4794146

End: 4794901

Strand: Direct

Name: tia

Synonym: ECIAI39_4596

Alternate gene names: NA

Gene position: 4794146-4794901 (Clockwise)

Preceding gene: 218702830

Following gene: 218702832

Centisome position: 93.42

GC content: 46.16

Gene sequence:

>756_bases
ATGATTGAAATGAAAAAGGTTATTGTTGTTTCAGCGCTTGCTATGGCGGGCGTATTTTCAGCCCAGGCTCTGGCTGATAG
GGGTAAAACAGGCTTTTATGTGACCGGTAAAGCTGGTGCTTCGGTTGTGACTCAGACTGACCAGCGCTTCCGTCAGGACT
TTGGGGATGATGTTTATAAGTATAAGGGCGGTGATAAAAACGATACTGTATTTGGTGCAGGCCTTGCGGTGGGCTATGAT
TTTTATCAACATTACAATGTTCCTGTGCGCACGGAAGTGGAATTCTATGGCCGCGGAGCTGCAGACTCCCATTATACACT
GGATACATGGCATTCTCCGATGGGGGATGGTGGTCGGGAAGACACACAGAACAGGCTCAGTGTGAATACCCTGATGGTGA
ATACGTATTATGACTTCAGAAACAGCAGTGCATTCACTCCATGGGTGTCTGTTGGACTGGGTTATGCACGGATACATCAT
AAGGCAACATATACTGATACCTCCTGGAATAAATCTGGTGAGGTGAGCGATATTTCTGCGTTGCATTACTCGGGATATGA
TAACAATTTCGCATGGAGCATTGGGGCCGGTGTTCGCTATGACATAACCCCGGATATCGCTCTTGACCTCAGCTATCGCT
ATCTGGATGCTGGTAAATCCTCCCTGTCTTACAAGGATGCAGAAGGGGATAAATATAAATCAGAGGCTGACGTTAAAAGT
CATGACATCATGTTTGGTGTGACTTATAACTTCTGA

Upstream 100 bases:

>100_bases
TTTGTCGATCGATTCGATCGAATTTTCTCTTTTTACCCTGTCTTTTGCATGGTTTTAAAATAAGCAACCTTCTTTATCGT
GCGGGTAAGAACCAACGGAG

Downstream 100 bases:

>100_bases
CGACACTGCTCCTGAGCAATAATTACACATATTCAGTAATTAAGATATTTATATATCTTCTGCAACTAAACAGAAATACC
CTGCAGTAATATACCGCAGG

Product: Tia invasion determinant

Products: NA

Alternate protein names: Tia Invasion Determinant; Heat Resistant Agglutinin 1 Protein; Exported Surface Protein; Adhesin/Virulence Factor Hek; Outer Membrane Adhesin; Porin Opacity Type; Surface Antigen Msp4 Family Protein

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MIEMKKVIVVSALAMAGVFSAQALADRGKTGFYVTGKAGASVVTQTDQRFRQDFGDDVYKYKGGDKNDTVFGAGLAVGYD
FYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPMGDGGREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARIHH
KATYTDTSWNKSGEVSDISALHYSGYDNNFAWSIGAGVRYDITPDIALDLSYRYLDAGKSSLSYKDAEGDKYKSEADVKS
HDIMFGVTYNF

Sequences:

>Translated_251_residues
MIEMKKVIVVSALAMAGVFSAQALADRGKTGFYVTGKAGASVVTQTDQRFRQDFGDDVYKYKGGDKNDTVFGAGLAVGYD
FYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPMGDGGREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARIHH
KATYTDTSWNKSGEVSDISALHYSGYDNNFAWSIGAGVRYDITPDIALDLSYRYLDAGKSSLSYKDAEGDKYKSEADVKS
HDIMFGVTYNF
>Mature_251_residues
MIEMKKVIVVSALAMAGVFSAQALADRGKTGFYVTGKAGASVVTQTDQRFRQDFGDDVYKYKGGDKNDTVFGAGLAVGYD
FYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPMGDGGREDTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARIHH
KATYTDTSWNKSGEVSDISALHYSGYDNNFAWSIGAGVRYDITPDIALDLSYRYLDAGKSSLSYKDAEGDKYKSEADVKS
HDIMFGVTYNF

Specific function: Unknown

COG id: COG3637

COG function: function code M; Opacity protein and related surface antigens

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27899; Mature: 27899

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEMKKVIVVSALAMAGVFSAQALADRGKTGFYVTGKAGASVVTQTDQRFRQDFGDDVYK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEHHHHHHHHHCCCCEEE
YKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPMGDGGRE
ECCCCCCCEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCC
DTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARIHHKATYTDTSWNKSGEVSDISA
CCCCEEEEEEEEEEEEECCCCCCCCCHHHHHCCCEEEEECEEEECCCCCCCCCCCCEEEE
LHYSGYDNNFAWSIGAGVRYDITPDIALDLSYRYLDAGKSSLSYKDAEGDKYKSEADVKS
EEECCCCCCEEEEECCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
HDIMFGVTYNF
CEEEEEEEECC
>Mature Secondary Structure
MIEMKKVIVVSALAMAGVFSAQALADRGKTGFYVTGKAGASVVTQTDQRFRQDFGDDVYK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEHHHHHHHHHCCCCEEE
YKGGDKNDTVFGAGLAVGYDFYQHYNVPVRTEVEFYGRGAADSHYTLDTWHSPMGDGGRE
ECCCCCCCEEEECHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCC
DTQNRLSVNTLMVNTYYDFRNSSAFTPWVSVGLGYARIHHKATYTDTSWNKSGEVSDISA
CCCCEEEEEEEEEEEEECCCCCCCCCHHHHHCCCEEEEECEEEECCCCCCCCCCCCEEEE
LHYSGYDNNFAWSIGAGVRYDITPDIALDLSYRYLDAGKSSLSYKDAEGDKYKSEADVKS
EEECCCCCCEEEEECCCEEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
HDIMFGVTYNF
CEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA