Click here to switch to the map view.

The map label for this gene is yjdP

Identifier: 218702757

GI number: 218702757

Start: 4722239

End: 4722577

Strand: Direct

Name: yjdP

Synonym: ECIAI39_4515

Alternate gene names: 218702757

Gene position: 4722239-4722577 (Clockwise)

Preceding gene: 218702756

Following gene: 218702773

Centisome position: 92.01

GC content: 56.93

Gene sequence:

>339_bases
ATGAAACGCTTTCCGCTATTTCTTTTATTCACGCTGCCCACGCTGCCCACGCTGTCCACCGTTCCGGCCCAGGCCGATAT
TATCGATGACACCATTGGCAATATTCAGCAGGCGATTAACGACGCTTATAACCCTGACCGTGGGCGAGACTATGAAGATT
CGCGCGACGACGGCTGGCAGCGTGAAGTGAGCGACGATCGGCGCAGACAATATGACGACCGCCGCCGCCAGTTTGAAGAT
CGCCGCAGGCAGCTGGACGATCGCCAGCGCCAGCTGGATCAGGAGCGTCGGCAGCTAGAAGATGAAGAGCGGAGAATGGA
AGATGAGTATGGGCGTTGA

Upstream 100 bases:

>100_bases
CGATTACGGCAATAGAGCAGCGGAGAAATTGAGATTCATCCACTACTTGCATGGATGAGTAATGACTAATGTGGATAGAG
TTTCTTTTTGAGGTTGGCTA

Downstream 100 bases:

>100_bases
TGTTGAGTTTAGAGCAGGCATCGCCCCTCACCCATCACGCCACCCCAATCTCCATCCCATCAAACCCCGCCTCAAACCCC
GACGGCAGTGCGTTTTCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKRFPLFLLFTLPTLPTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQREVSDDRRRQYDDRRRQFED
RRRQLDDRQRQLDQERRQLEDEERRMEDEYGR

Sequences:

>Translated_112_residues
MKRFPLFLLFTLPTLPTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQREVSDDRRRQYDDRRRQFED
RRRQLDDRQRQLDQERRQLEDEERRMEDEYGR
>Mature_112_residues
MKRFPLFLLFTLPTLPTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQREVSDDRRRQYDDRRRQFED
RRRQLDDRQRQLDQERRQLEDEERRMEDEYGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994996, Length=112, Percent_Identity=94.6428571428571, Blast_Score=98, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13764; Mature: 13764

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFPLFLLFTLPTLPTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQ
CCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
REVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERRMEDEYGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRFPLFLLFTLPTLPTLSTVPAQADIIDDTIGNIQQAINDAYNPDRGRDYEDSRDDGWQ
CCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
REVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERRMEDEYGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]