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The map label for this gene is yidL

Identifier: 218702528

GI number: 218702528

Start: 4458650

End: 4459573

Strand: Direct

Name: yidL

Synonym: ECIAI39_4283

Alternate gene names: 218702528

Gene position: 4458650-4459573 (Clockwise)

Preceding gene: 218702522

Following gene: 218702531

Centisome position: 86.88

GC content: 43.4

Gene sequence:

>924_bases
GTGAGCATAATTCGCCGGAGGGATATTAAAATGAATGGAAAATTGCAAAGTTCGGATGTAAAAAACGAAACTCCGTACAA
TATTCCCTTATTGATTAACGAAAATGTGATCTCCAGCGGAATTTCTCTGATCTCGCTCTGGCATACCTACGCCGACGAGC
ATTACCGGGTGATCTGGCCGCGGGACAAGAAGAAACCGCTTATCGCCAACTCATGGGTTGCGGTGTATACCGTACAAGGA
TGTGGGAAAATTCTTTTAAAGAATGGCGAACAAATAACTCTGCATGGCAACTGTATTATATTTTTAAAGCCAATGGATAT
TCACTCTTATCACTGTGAAGGTTTAGTCTGGGAACAGTACTGGATGGAATTTACCCCCACCAGTATGATGGATATTCCCG
TTGGTCAGCAAAGCGTTATTTATAATGGCGAAATTTATAATCAGGAACTCACCGAAGTTGCTGAGTTAATAACTTCACCA
GAAGCAATAAAAAATAATCTGGCAGTCGCTTTTCTGACGAAAATTATTTATCAGTGGATTTGTCTTATGTACGCAGACGG
TAAAAAAGATCCACAACGGCGGCAAATTGAAAATTTAATTGCCACTTTACATGCCAGTCTGCAACAACGCTGGAGCGTAG
CTGATATGGCTGCCACGATCCCCTGTAGCGAAGCCTGGTTGCGTCGTCTGTTTTTACGCTATACCGGCAAGACGCCGAAA
GAATATTACCTCGATGCGCGTCTGGATCTGGCGCTATCGCTATTAAAACAACAAGGAAACTCGGTTGGCGAAGTCGCTGA
TACGCTCAACTTCTTCGACTCCTTTCATTTCAGCAAAGCCTTTAAAAATAAATTTGGTTATGCGCCGTCAGCTGTGCTGA
AGAATACGGACCAGCACCCAACGGATGCCAGTCCACACAATTAA

Upstream 100 bases:

>100_bases
TGAATATATGGAGAGGTAAAATGCGTCGGGTCAGGCAGTCAGATTCTTAAAATACAAACATCGTATCCCTGAACGGATTG
TTTTCTGTTAAGTTCAGGTT

Downstream 100 bases:

>100_bases
CGTAACTCTGGCCAGTACGCTTTGTTGGCCTCCAGCAACTCATCCAGAATAGCTTTGGCGACCGCGGCGCTCGGTACCGT
TTTCGACAACGTAATCGCCT

Product: putative DNA-binding transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSIIRRRDIKMNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQG
CGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSP
EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIENLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK
EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKNKFGYAPSAVLKNTDQHPTDASPHN

Sequences:

>Translated_307_residues
MSIIRRRDIKMNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQG
CGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSP
EAIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIENLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK
EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKNKFGYAPSAVLKNTDQHPTDASPHN
>Mature_306_residues
SIIRRRDIKMNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWPRDKKKPLIANSWVAVYTVQGC
GKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQYWMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPE
AIKNNLAVAFLTKIIYQWICLMYADGKKDPQRRQIENLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPKE
YYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKNKFGYAPSAVLKNTDQHPTDASPHN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI226510985, Length=297, Percent_Identity=99.3265993265993, Blast_Score=620, Evalue=1e-179,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR018060 [H]

Pfam domain/function: PF02311 AraC_binding; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35191; Mature: 35060

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIRRRDIKMNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWP
CCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEC
RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY
CCCCCCEEECCEEEEEEECCCCEEEECCCCEEEEECCEEEEEEECCCCCCCCCCEEHHHH
WMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI
HHHCCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
CLMYADGKKDPQRRQIENLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCH
EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKNKFGYAPSAVLKNTDQHP
HHEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
TDASPHN
CCCCCCC
>Mature Secondary Structure 
SIIRRRDIKMNGKLQSSDVKNETPYNIPLLINENVISSGISLISLWHTYADEHYRVIWP
CCCCCCCCCCCCEECCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEC
RDKKKPLIANSWVAVYTVQGCGKILLKNGEQITLHGNCIIFLKPMDIHSYHCEGLVWEQY
CCCCCCEEECCEEEEEEECCCCEEEECCCCEEEEECCEEEEEEECCCCCCCCCCEEHHHH
WMEFTPTSMMDIPVGQQSVIYNGEIYNQELTEVAELITSPEAIKNNLAVAFLTKIIYQWI
HHHCCCCCEEECCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
CLMYADGKKDPQRRQIENLIATLHASLQQRWSVADMAATIPCSEAWLRRLFLRYTGKTPK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCH
EYYLDARLDLALSLLKQQGNSVGEVADTLNFFDSFHFSKAFKNKFGYAPSAVLKNTDQHP
HHEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCC
TDASPHN
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]