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The map label for this gene is yeeS

Identifier: 218702486

GI number: 218702486

Start: 4411905

End: 4412396

Strand: Direct

Name: yeeS

Synonym: ECIAI39_4241

Alternate gene names: 218702486

Gene position: 4411905-4412396 (Clockwise)

Preceding gene: 218702485

Following gene: 218702487

Centisome position: 85.97

GC content: 58.54

Gene sequence:

>492_bases
ATGGAGAGAAGCACAATGCAACAGCTTTCCTTTCTGCCCGTAGCGATGACGCCCGGTGAGCGCAGCCTCATTCAGCGGGC
CCTGAAAACCCTGAACCGCCATCTTCATGAACCCGGCGTGGCCTTCACCTCCACCCGTGCGGCACGGGAATGGCTGATAC
TGAACATGGCGGGACTGGAGCGGGAAGAGTTCCGGGTGCTGTATCTGAACAACCAGAATCAGCTGATTGCCGGTGAAACC
CTCTTCACTGGCACCATCAACCGCACAGAAGTCCATCCCCGGGAGGTGATTAAACGCGCCCTGTACCACAATGCCGCTGC
CGTGGTGCTGGCGCACAATCACCCGTCCGGTGAAGTCACCCCCAGCAAGGCAGACCGCCTTATCACTGAGCGTCTGGTAC
AGGCACTGGCCCTGGTGGATATCCGGGTACCGGACCATCTGATAATCGGTGGCAGCCAGGTTTTCTCCTTTGCGGAACAC
GGTCTGCTTTAA

Upstream 100 bases:

>100_bases
TCGTACGGAGTGTTATGCCATGACGGTCCATTATTACCGGTTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCA
TTATGCGCATCATCGACTGA

Downstream 100 bases:

>100_bases
CCCGTCACCGTCACAATCACCTTCATATCACTTCAGTTTCTCTTTCTCAGCTGTTTCTTACTTTCACATTCAGGAGGACT
ATTCTCATGAAAATCATCAC

Product: putative DNA repair protein; CP4-44 prophage

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MERSTMQQLSFLPVAMTPGERSLIQRALKTLNRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET
LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALALVDIRVPDHLIIGGSQVFSFAEH
GLL

Sequences:

>Translated_163_residues
MERSTMQQLSFLPVAMTPGERSLIQRALKTLNRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET
LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALALVDIRVPDHLIIGGSQVFSFAEH
GLL
>Mature_163_residues
MERSTMQQLSFLPVAMTPGERSLIQRALKTLNRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGET
LFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVTPSKADRLITERLVQALALVDIRVPDHLIIGGSQVFSFAEH
GLL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788312, Length=148, Percent_Identity=97.2972972972973, Blast_Score=295, Evalue=8e-82,
Organism=Escherichia coli, GI2367100, Length=158, Percent_Identity=79.746835443038, Blast_Score=264, Evalue=3e-72,
Organism=Escherichia coli, GI1788997, Length=163, Percent_Identity=69.9386503067485, Blast_Score=232, Evalue=7e-63,
Organism=Escherichia coli, GI87082300, Length=120, Percent_Identity=49.1666666666667, Blast_Score=129, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 18277; Mature: 18277

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSTMQQLSFLPVAMTPGERSLIQRALKTLNRHLHEPGVAFTSTRAAREWLILNMAGLE
CCHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHEEEEECCCCC
REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT
CCCEEEEEECCCCCEEECCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCC
PSKADRLITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCC
>Mature Secondary Structure
MERSTMQQLSFLPVAMTPGERSLIQRALKTLNRHLHEPGVAFTSTRAAREWLILNMAGLE
CCHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHEEEEECCCCC
REEFRVLYLNNQNQLIAGETLFTGTINRTEVHPREVIKRALYHNAAAVVLAHNHPSGEVT
CCCEEEEEECCCCCEEECCEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCC
PSKADRLITERLVQALALVDIRVPDHLIIGGSQVFSFAEHGLL
HHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]