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The map label for this gene is pduA [H]

Identifier: 218702452

GI number: 218702452

Start: 4378394

End: 4378723

Strand: Direct

Name: pduA [H]

Synonym: ECIAI39_4205

Alternate gene names: 218702452

Gene position: 4378394-4378723 (Clockwise)

Preceding gene: 218702450

Following gene: 218702453

Centisome position: 85.31

GC content: 50.61

Gene sequence:

>330_bases
GTGTCACGGACGGTTTTCCTGAATCACAAAACCTGTTCTGAGGAGATCACCATGGGTGATGCATTAGGGCTTATCGAAAC
CAAAGGCCTGGTGGCCTGTATTGCCGCAGCGGATGCGATGTGTAAATCCGCCAACGTTGAACTGATTGGCTATGAAAACA
TCGGCTCTGGTCTGGTGACCGTGATGGTGAAAGGCGACGTTGGCGCAGTGAAAGCATCTGTCGATTCTGGACTTGAGTCC
GCACAGCACATCGGGGAAGTGGTGACGTCGCTGGTTATCGCGCGTCCTCACAACGACATCAACAAAATCGTTACTAAACA
TAAAGCTTAA

Upstream 100 bases:

>100_bases
AGAATTTAATTCTAAATTATTGCTGTCAGCAGATTTAAATTCCACAAAATTCCATGAGCTCTATAGTGACATTCGAACGC
CGCTTCCGTGAGTTAACGCT

Downstream 100 bases:

>100_bases
GGCCGGAGGGAAGAAACATGGGTGATGCATTAGGTCTGATTGAAACCAAAGGTTTGGTGGCTTGTATTGAAGCAGCTGAC
GCGATGTGTAAGGCCGCCAA

Product: putative propanediol utilization protein PduJ/pduA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MSRTVFLNHKTCSEEITMGDALGLIETKGLVACIAAADAMCKSANVELIGYENIGSGLVTVMVKGDVGAVKASVDSGLES
AQHIGEVVTSLVIARPHNDINKIVTKHKA

Sequences:

>Translated_109_residues
MSRTVFLNHKTCSEEITMGDALGLIETKGLVACIAAADAMCKSANVELIGYENIGSGLVTVMVKGDVGAVKASVDSGLES
AQHIGEVVTSLVIARPHNDINKIVTKHKA
>Mature_108_residues
SRTVFLNHKTCSEEITMGDALGLIETKGLVACIAAADAMCKSANVELIGYENIGSGLVTVMVKGDVGAVKASVDSGLESA
QHIGEVVTSLVIARPHNDINKIVTKHKA

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=84, Percent_Identity=55.952380952381, Blast_Score=86, Evalue=5e-19,
Organism=Escherichia coli, GI87082105, Length=88, Percent_Identity=44.3181818181818, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 11364; Mature: 11233

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTVFLNHKTCSEEITMGDALGLIETKGLVACIAAADAMCKSANVELIGYENIGSGLVT
CCCEEEEECCCCCCHHCCCCCCCEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEE
VMVKGDVGAVKASVDSGLESAQHIGEVVTSLVIARPHNDINKIVTKHKA
EEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
SRTVFLNHKTCSEEITMGDALGLIETKGLVACIAAADAMCKSANVELIGYENIGSGLVT
CCEEEEECCCCCCHHCCCCCCCEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCEEE
VMVKGDVGAVKASVDSGLESAQHIGEVVTSLVIARPHNDINKIVTKHKA
EEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]