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The map label for this gene is intB [H]

Identifier: 218702440

GI number: 218702440

Start: 4367382

End: 4367612

Strand: Direct

Name: intB [H]

Synonym: ECIAI39_4193

Alternate gene names: 218702440

Gene position: 4367382-4367612 (Clockwise)

Preceding gene: 218702437

Following gene: 218702441

Centisome position: 85.1

GC content: 48.48

Gene sequence:

>231_bases
TTGCAACGGCATGGAAGTATTGAGACCAGAACAGCACGAGATAAAGCGGCTGAACGTCAGATGAGCCACATGGACGTAAC
TCAGTGCAGGCCGTGTATAATCCATAAAGCGGAATATCTGGATAAGCGTAAGCTGATGTTGCAGTGGTGGGTCGATTTTC
TGGATGCCAATCGGGAAAGAGCGATTACGCCGTTTGACTATTCGAAGATCAATCGGGGTAATGGCGAGTGA

Upstream 100 bases:

>100_bases
AAAGAGAAAATTCGATCGAATCGATCGACAAAACCGATCATGCATGATGAAGATTTCTTATCGAAGACATGAAAATGGTA
AGGAATGGTTTAAGAGGTAA

Downstream 100 bases:

>100_bases
GTTGAATGCCGTTACTCCTTGGCTGATGTTTAAATTTAAAAGACCAACCAGACCGCTTAGGACTGGTTGGTCGCTGTATT
TCATCTGCCAGGTACAGAGC

Product: putative Prophage integrase (fragment)

Products: NA

Alternate protein names: Int(P4) [H]

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MQRHGSIETRTARDKAAERQMSHMDVTQCRPCIIHKAEYLDKRKLMLQWWVDFLDANRERAITPFDYSKINRGNGE

Sequences:

>Translated_76_residues
MQRHGSIETRTARDKAAERQMSHMDVTQCRPCIIHKAEYLDKRKLMLQWWVDFLDANRERAITPFDYSKINRGNGE
>Mature_76_residues
MQRHGSIETRTARDKAAERQMSHMDVTQCRPCIIHKAEYLDKRKLMLQWWVDFLDANRERAITPFDYSKINRGNGE

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 9065; Mature: 9065

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRHGSIETRTARDKAAERQMSHMDVTQCRPCIIHKAEYLDKRKLMLQWWVDFLDANRER
CCCCCCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AITPFDYSKINRGNGE
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQRHGSIETRTARDKAAERQMSHMDVTQCRPCIIHKAEYLDKRKLMLQWWVDFLDANRER
CCCCCCCCCHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
AITPFDYSKINRGNGE
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]