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The map label for this gene is yhiR

Identifier: 218702252

GI number: 218702252

Start: 4147494

End: 4148336

Strand: Direct

Name: yhiR

Synonym: ECIAI39_3989

Alternate gene names: 218702252

Gene position: 4147494-4148336 (Clockwise)

Preceding gene: 218702249

Following gene: 218702253

Centisome position: 80.82

GC content: 54.8

Gene sequence:

>843_bases
ATGCTCAGTTATCGCCATAGCTTTCACGCTGGCAACCACGCCGACGTCCTTAAACATACCGTTCAGAGCCTGATCATTGA
GTCGCTGAAAGAGAAAGATAAACCGTTTCTTTATCTCGATACCCACGCAGGGGCCGGGCGTTATCAGTTAGGCAGCGAAC
ATGCCGAGCGTACCGGCGAATATCTCGAAGGTATCGCCCGTATCTGGCAGCAGGACGATTTGCCTGCGGAGCTGGAGCCG
TACATCAGCGTGGTGGAACATTTTAACCGTAGCGGGCAGTTGCGTTACTACCCCGGTTCGCCGTTGATTGCTCGTCAGTT
ACTGCGTGAACAGGACAGCCTGCAACTGACCGAACTGCACCCGAGCGATTACCCGTTGCTGCGTTCTGAATTTCAGAAAG
ACAGCCGTGCGCGCGTCGAAAAAGCCGATGGTTTCCAGCAACTTAAGGCCAAACTGCCGCCGGTTTCCCGCCGTGGTTTA
ATCCTTATCGACCCGCCGTATGAAATGAAAACCGACTATCAGGCGGTGGTCAGCGGGATAGCAGAAGGTTACAAACGTTT
CGCCACTGGCACTTACGCATTGTGGTATCCAGTGGTGCTGCGCCAGCAAATTAAGCGCATGATCCACGACCTGGAAGCGA
CCGGCATTCGCAAAATTCTGCAAATTGAACTGGCGGTGCTGCCAGACAGCGATCGCCGTGGCATGACCGCTTCCGGCATG
ATTGTGATTAACCCGCCGTGGAAGCTGGAACAGCAGATGAATAACGTGCTGCCGTGGCTGCACAGTAAACTGGTTCCAGC
TGGCACCGGGCACGCCACCGTAAGCTGGATCGTGCCAGAGTAA

Upstream 100 bases:

>100_bases
ACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATAGGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTAC
TTACCGGAACACCTTTACCC

Downstream 100 bases:

>100_bases
TTGCAGCCATTGCTGGCACCTATTACGTCTCGCGCTACAATCGCGGTAATCAACGATAAGGACAATATGTCATGACTAAA
CACTATGATTACATCGCCAT

Product: putative DNA (exogenous) processing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEP
YISVVEHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE

Sequences:

>Translated_280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEP
YISVVEHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
>Mature_280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEP
YISVVEHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=280, Percent_Identity=98.2142857142857, Blast_Score=565, Evalue=1e-162,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 31945; Mature: 31945

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHH
YLEGIARIWQQDDLPAELEPYISVVEHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELH
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCEEEECC
PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHH
AEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEECCE
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
EEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAGAGRYQLGSEHAERTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHH
YLEGIARIWQQDDLPAELEPYISVVEHFNRSGQLRYYPGSPLIARQLLREQDSLQLTELH
HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCEEEECC
PSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGLILIDPPYEMKTDYQAVVSGI
CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHH
AEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRKILQIELAVLPDSDRRGMTASGM
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEECCE
IVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSWIVPE
EEECCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]