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The map label for this gene is ygjR

Identifier: 218701858

GI number: 218701858

Start: 3743628

End: 3744632

Strand: Direct

Name: ygjR

Synonym: ECIAI39_3583

Alternate gene names: 218701858

Gene position: 3743628-3744632 (Clockwise)

Preceding gene: 218701857

Following gene: 218701859

Centisome position: 72.95

GC content: 52.34

Gene sequence:

>1005_bases
ATGGAGTATCCACGCGTTATGATACGTTTCGCTGTGATTGGTACGAACTGGATCACTCGCCAGTTCGTCGAGGCCGCCCA
TGAGAGCGGTAAATACAAGTTAACCGCCGTTTATTCCCGCAGCCTTGAGCAGGCCCAGCACTTCGCCAATGATTTTTCTG
TCGAGCATCTGTTTACCTCGCTGGAAGCGATGGCAGAAAGCGATGCCATTGACGCGGTGTATATTGCCAGCCCGAATGCC
CTGCACTTTTCCCAGACACAACTTTTCCTTAGCCATAAAATTCATGTGATTTGCGAGAAACCACTGGCGTCGAATCTGGC
GGAAGTGGATGCCGCCATTGCCTGTGCGCGGGAAAATCAGGTGGTGCTGTTTGAGGCATTTAAAACCGCCTGCCTGCCGA
ACTTTCATTTGCTGCGCCAGGCGCTGCCGAAAGTCGGCAAATTGCGTAAAGTCTTTTTCAACTATTGCCAGTATTCCTCG
CGGTATCAACGTTACCTGGATGGTGAGAATCCCAACACCTTTAATCCGGCATTCTCTAACGGTTCAATTATGGATATCGG
CTTTTACTGCCTGGCGTCGGCGGTAGCGTTATTTGGTGAGCCGAAAAGCGTGCAGGCAACCGCCAGTTTACTGGCAAGTG
GTGTAGATGCCCACGGCGTGGTGGTGATGGATTACGGTGATTTCAGCGTCACCTTGCAGCACTCAAAGGTCAGTGATTCT
GTCCTGGCAAGCGAGATTCAGGGCGAAGCGGGATCGCTGGTGATTGAAAAACTGTCTGAATGCCAGAAAGTGTGCTTCGT
GCCGCGTGGCAGCCAGATGCAGGATCTCACCCAGCCGCAGCATATTAATACCATGCTCTACGAAGCAGAGCTGTTTGCTA
CCCTGGTGGATGAGCATCTGGTGGATCATCCAGGGCTGGCGGTCAGTCGCATCACCGCCAAACTGCTGACTGAGATCCGC
CGCCAGACTGGGGTGATTTTTCCGGCAGATAGCGTAAAACTATAA

Upstream 100 bases:

>100_bases
TGGGCCGTTTAGTGAGCATGGCTGTCCGCCGAAAGAATAATGCGTATCTGCGCACGTCGAAGATGAAAAAGGCGTGCTAC
ATTGACGACAGAATCCCTTT

Downstream 100 bases:

>100_bases
TTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAA
AGGGGAGTAACTTCATTGCC

Product: putative NAD(P)-binding dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNA
LHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSS
RYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDS
VLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIR
RQTGVIFPADSVKL

Sequences:

>Translated_334_residues
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNA
LHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSS
RYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDS
VLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIR
RQTGVIFPADSVKL
>Mature_334_residues
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNA
LHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQVVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSS
RYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDS
VLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIR
RQTGVIFPADSVKL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=348, Percent_Identity=25.5747126436782, Blast_Score=97, Evalue=2e-20,
Organism=Escherichia coli, GI145693182, Length=328, Percent_Identity=99.0853658536585, Blast_Score=674, Evalue=0.0,
Organism=Drosophila melanogaster, GI24581117, Length=345, Percent_Identity=26.0869565217391, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24581115, Length=339, Percent_Identity=23.3038348082596, Blast_Score=78, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24584727, Length=213, Percent_Identity=26.7605633802817, Blast_Score=74, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37007; Mature: 37007

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTS
CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHHH
LEAMAESDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQ
HHHHHCCCCCCEEEEECCCCEEHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCC
VVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPAFSN
EEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDS
CCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCHHH
VLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHL
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL
HCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC
>Mature Secondary Structure
MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQAQHFANDFSVEHLFTS
CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHCHHHHHHHH
LEAMAESDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPLASNLAEVDAAIACARENQ
HHHHHCCCCCCEEEEECCCCEEHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCC
VVLFEAFKTACLPNFHLLRQALPKVGKLRKVFFNYCQYSSRYQRYLDGENPNTFNPAFSN
EEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAHGVVVMDYGDFSVTLQHSKVSDS
CCEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCHHH
VLASEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDLTQPQHINTMLYEAELFATLVDEHL
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHH
VDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL
HCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]