Click here to switch to the map view.

The map label for this gene is yiaM [C]

Identifier: 218701667

GI number: 218701667

Start: 3530482

End: 3530994

Strand: Direct

Name: yiaM [C]

Synonym: ECIAI39_3375

Alternate gene names: 218701667

Gene position: 3530482-3530994 (Clockwise)

Preceding gene: 218701666

Following gene: 218701668

Centisome position: 68.79

GC content: 43.27

Gene sequence:

>513_bases
ATGCTTACAATGATATTTAACCGCCTGAAACTTGCGGTAGACCGCGTCATTGCCGCGTTTTCTGTCGCCGTAATGCTTGC
TCTGGTTGTATGCGTAGTCTGGCAAGTATTTAGCCGCTACGTACTTAACCAGCCAAGTACATTAACCGATGAGCTGGCAC
GCTTTTTGATGATCTGGGTAGGATTATTAGGTGCTGCATATACCGTCGGCGCGCAGAGACATCTCTCTATCGATTTATTT
GCTCTCGCCCTGAATAAGCGCAAGCAATTACTTCTTAGTATAGTCATTAACGTTCTTATTTTAGGTTTTGCCGGTTCGGT
CATTGTGACTGGTGGCCTGAAATTAATTGATAAAACACTGGCAACATCACAGGTATCTGCCGCGATGCAAATACCGATGG
GATACGTATATATCATTCTGCCATTAAGTGGATTGGTGATGATGTTTTATGCCTTGTGTTTTATTAATCAAAGCATTCAA
CAACTGAAACAACCTGTGCAGGAGGCCAGTTAA

Upstream 100 bases:

>100_bases
ACGACTTCAAAAAAGATCCAAAACAAGCTGCTTTGTTAGAGAAATTCGACAACGCTGCTCAATAATATTTCGGGCCAGTC
TCTGGCCCTGATTTTCCAGG

Downstream 100 bases:

>100_bases
TGGATAGTTATATCGCGCTTACACTGTTTGGCTGTTTTTTTGTGCTGGTCTTTATTGGTGTGCCCATTTCGTTCTCAATC
GGTATTGCCACTGTAGCTTC

Product: putative TRAP-type C4-dicarboxylate transport system, small permease component

Products: NA

Alternate protein names: Tripartite ATP-Independent Periplasmic Transporter DctQ; TRAP Transporter DctQ-Like Membrane Protein; Aspartate Kinase Monofunctional Class; 30S Ribosomal; Membrane Transporter; TRAP-Type C4-Dicarboxylate Transport System; TRAP Transporter DctQ Family Protein; C4-Dicarboxylate Transport System Permease; C4-Dicarboxylate Transport System Small Permease; C4-Dicarboxylate Transporter Small Permease Component; ATP-Independent Transporter Subunit; Inner Membrane Protein; C4-Dicarboxylate Transport System; TRAP Transporter Small Transmembrane Protein; TRAP Dicarboxylate Transporter DctQ Subunit; C4-Dicarboxylate Permease Small Protein; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MLTMIFNRLKLAVDRVIAAFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWVGLLGAAYTVGAQRHLSIDLF
ALALNKRKQLLLSIVINVLILGFAGSVIVTGGLKLIDKTLATSQVSAAMQIPMGYVYIILPLSGLVMMFYALCFINQSIQ
QLKQPVQEAS

Sequences:

>Translated_170_residues
MLTMIFNRLKLAVDRVIAAFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWVGLLGAAYTVGAQRHLSIDLF
ALALNKRKQLLLSIVINVLILGFAGSVIVTGGLKLIDKTLATSQVSAAMQIPMGYVYIILPLSGLVMMFYALCFINQSIQ
QLKQPVQEAS
>Mature_170_residues
MLTMIFNRLKLAVDRVIAAFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWVGLLGAAYTVGAQRHLSIDLF
ALALNKRKQLLLSIVINVLILGFAGSVIVTGGLKLIDKTLATSQVSAAMQIPMGYVYIILPLSGLVMMFYALCFINQSIQ
QLKQPVQEAS

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18693; Mature: 18693

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTMIFNRLKLAVDRVIAAFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GLLGAAYTVGAQRHLSIDLFALALNKRKQLLLSIVINVLILGFAGSVIVTGGLKLIDKTL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ATSQVSAAMQIPMGYVYIILPLSGLVMMFYALCFINQSIQQLKQPVQEAS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTMIFNRLKLAVDRVIAAFSVAVMLALVVCVVWQVFSRYVLNQPSTLTDELARFLMIWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
GLLGAAYTVGAQRHLSIDLFALALNKRKQLLLSIVINVLILGFAGSVIVTGGLKLIDKTL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ATSQVSAAMQIPMGYVYIILPLSGLVMMFYALCFINQSIQQLKQPVQEAS
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA