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The map label for this gene is ygeH

Identifier: 218701567

GI number: 218701567

Start: 3420871

End: 3422247

Strand: Direct

Name: ygeH

Synonym: ECIAI39_3273

Alternate gene names: 218701567

Gene position: 3420871-3422247 (Clockwise)

Preceding gene: 218701566

Following gene: 218701568

Centisome position: 66.66

GC content: 34.93

Gene sequence:

>1377_bases
ATGGACTTAGAAAATAAATTCTCATATCATTTTCTTGAGGGATTAACGCTCACGGAAGATGGAATTCTTACTCAAGGAAA
TGAGCAGATTTATATTCCACCGAAAGAGTTAGGAGTATTGATCGTATTACTTGAATCCGCTGGTCATGTTGTCCTGAAAG
ATATGATCATCGAATCAGTATGGAAAAATATTATTGTAAGTGACGAGTCCCTGACAAGATGTATCTATTCTTTGCGCTGC
ATTTTTGAAAAAATTGGCTATGATCGTTGCATAGAAACAATCTACCGGAAAGGTTATCGTTTCAGTGGACAGGTTTTCAA
AACTAAAATAAATGAAGATAACACTTCAGACTATTCCATAGCTATATTTCCTTTCACCACTTCATTGAATACCCTGGATC
CATTAATACTTAATCAGGAATTAGTGCAAAACATTTCGGATAAAAAAATCGATGGCCTTTATACCTATCCGATGGCTGCG
ACAAATTTTTGTAATGATCACATATCGCAAAATTCATTTTTGAGAAGATTCAAGCCAGATTATTTCGTTACAGGAAGAAT
AAATCAGAATAACGCGGTGAAAACTTTATACATTGAACTGATCGACGCTAAAAATCTTTTCCTCATCGCCAGTAATCATC
TTCCTGTTGATGAACTACATAACACATCACAATTTATTATAGATAATATCCTTCAAACGGTACATAATCCAGAGCGTTCT
GTAAGATTAGCTAAACCGAACCAAGGTTACAAGAATCATTATTTATCAGATGAACTGTTGGCTGGTAAGAAAGAACTTTA
CGAGTTTACTCCTGAAAGCATTTACAGGGCTATGGCTATATTTGATGGATTACAAAATAAAAGTGATATACAGACGCTAA
AAATAGAATGTTATTGTCTGCTAGCGGAATGCCATATGTCTTTGGCACTTCATGGAAAGTATGAACTTGAACTTGCTGCT
CAAAAAGCATTAGAGCTTTTACATTATGTATCAGACATAACCAATGTCGATGGAAAAATTTTAGCTATTATGGGACTGAT
AACTGGTCTGTCTGGACAAGCAAAAGTATCTCATATCTTATTTGAACAGGCTAAGATACACACAACTGATATAGCCTCTC
TCTACTACTATAGAGCACTTGTCAATTTTCATAATGAAAGAATTGAAGAGGCAAGGATTTGTATAGACAAATCACTACAA
CTCGAACCCAGAAGACGAAAAGCAGTTGTGATAAAAGAGTGTGTAGATATGTATGTGCCTAACCCGCTCAAAAGCAACAT
GAAACTCTACTATAAAGAAACTTCGAGTGAAAGCCATCGAGTTATAATTGACAACATTTTGAAACTAAAGCAACTAACGA
GAATTTGTATGCGATAA

Upstream 100 bases:

>100_bases
GTAAACTCCTGTAGCATTAATGACACATAAATATGAATAGCCACAATTTCTATTGCTTATGCAGGATGCAAGAAACCAAT
TTTTTCATAGAGGTTAACTA

Downstream 100 bases:

>100_bases
ATCTTTATTGTCGCAATTTTATTGTTTAGATGTATGCAACTGGTTATGTAAACAACAGAGATGAAAACATCTAAGATAAT
TACCTTATTGCAATATATAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 458; Mature: 458

Protein sequence:

>458_residues
MDLENKFSYHFLEGLTLTEDGILTQGNEQIYIPPKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRC
IFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQNISDKKIDGLYTYPMAA
TNFCNDHISQNSFLRRFKPDYFVTGRINQNNAVKTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHNPERS
VRLAKPNQGYKNHYLSDELLAGKKELYEFTPESIYRAMAIFDGLQNKSDIQTLKIECYCLLAECHMSLALHGKYELELAA
QKALELLHYVSDITNVDGKILAIMGLITGLSGQAKVSHILFEQAKIHTTDIASLYYYRALVNFHNERIEEARICIDKSLQ
LEPRRRKAVVIKECVDMYVPNPLKSNMKLYYKETSSESHRVIIDNILKLKQLTRICMR

Sequences:

>Translated_458_residues
MDLENKFSYHFLEGLTLTEDGILTQGNEQIYIPPKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRC
IFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQNISDKKIDGLYTYPMAA
TNFCNDHISQNSFLRRFKPDYFVTGRINQNNAVKTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHNPERS
VRLAKPNQGYKNHYLSDELLAGKKELYEFTPESIYRAMAIFDGLQNKSDIQTLKIECYCLLAECHMSLALHGKYELELAA
QKALELLHYVSDITNVDGKILAIMGLITGLSGQAKVSHILFEQAKIHTTDIASLYYYRALVNFHNERIEEARICIDKSLQ
LEPRRRKAVVIKECVDMYVPNPLKSNMKLYYKETSSESHRVIIDNILKLKQLTRICMR
>Mature_458_residues
MDLENKFSYHFLEGLTLTEDGILTQGNEQIYIPPKELGVLIVLLESAGHVVLKDMIIESVWKNIIVSDESLTRCIYSLRC
IFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSIAIFPFTTSLNTLDPLILNQELVQNISDKKIDGLYTYPMAA
TNFCNDHISQNSFLRRFKPDYFVTGRINQNNAVKTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHNPERS
VRLAKPNQGYKNHYLSDELLAGKKELYEFTPESIYRAMAIFDGLQNKSDIQTLKIECYCLLAECHMSLALHGKYELELAA
QKALELLHYVSDITNVDGKILAIMGLITGLSGQAKVSHILFEQAKIHTTDIASLYYYRALVNFHNERIEEARICIDKSLQ
LEPRRRKAVVIKECVDMYVPNPLKSNMKLYYKETSSESHRVIIDNILKLKQLTRICMR

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1789216, Length=458, Percent_Identity=94.9781659388646, Blast_Score=896, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 52734; Mature: 52734

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLENKFSYHFLEGLTLTEDGILTQGNEQIYIPPKELGVLIVLLESAGHVVLKDMIIESV
CCCCCCCCHHHHCCEEEECCCCEECCCCEEEECHHHHCEEEEEECCCCHHHHHHHHHHHH
WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI
HHHHEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEE
AIFPFTTSLNTLDPLILNQELVQNISDKKIDGLYTYPMAATNFCNDHISQNSFLRRFKPD
EEEEEECCCCCCCHHHCCHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHHCCCC
YFVTGRINQNNAVKTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHNPERS
EEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHCCCCCC
VRLAKPNQGYKNHYLSDELLAGKKELYEFTPESIYRAMAIFDGLQNKSDIQTLKIECYCL
EEEECCCCCCHHCCCCHHHHHCHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEE
LAECHMSLALHGKYELELAAQKALELLHYVSDITNVDGKILAIMGLITGLSGQAKVSHIL
EEHHHHHEEECCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHH
FEQAKIHTTDIASLYYYRALVNFHNERIEEARICIDKSLQLEPRRRKAVVIKECVDMYVP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
NPLKSNMKLYYKETSSESHRVIIDNILKLKQLTRICMR
CCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLENKFSYHFLEGLTLTEDGILTQGNEQIYIPPKELGVLIVLLESAGHVVLKDMIIESV
CCCCCCCCHHHHCCEEEECCCCEECCCCEEEECHHHHCEEEEEECCCCHHHHHHHHHHHH
WKNIIVSDESLTRCIYSLRCIFEKIGYDRCIETIYRKGYRFSGQVFKTKINEDNTSDYSI
HHHHEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEE
AIFPFTTSLNTLDPLILNQELVQNISDKKIDGLYTYPMAATNFCNDHISQNSFLRRFKPD
EEEEEECCCCCCCHHHCCHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCHHHHHHHCCCC
YFVTGRINQNNAVKTLYIELIDAKNLFLIASNHLPVDELHNTSQFIIDNILQTVHNPERS
EEEEEEECCCCCEEEEEEEEECCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHCCCCCC
VRLAKPNQGYKNHYLSDELLAGKKELYEFTPESIYRAMAIFDGLQNKSDIQTLKIECYCL
EEEECCCCCCHHCCCCHHHHHCHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEEEEE
LAECHMSLALHGKYELELAAQKALELLHYVSDITNVDGKILAIMGLITGLSGQAKVSHIL
EEHHHHHEEECCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHH
FEQAKIHTTDIASLYYYRALVNFHNERIEEARICIDKSLQLEPRRRKAVVIKECVDMYVP
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
NPLKSNMKLYYKETSSESHRVIIDNILKLKQLTRICMR
CCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]