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The map label for this gene is yqeH

Identifier: 218701561

GI number: 218701561

Start: 3416070

End: 3416702

Strand: Direct

Name: yqeH

Synonym: ECIAI39_3266

Alternate gene names: 218701561

Gene position: 3416070-3416702 (Clockwise)

Preceding gene: 218701560

Following gene: 218701562

Centisome position: 66.56

GC content: 37.6

Gene sequence:

>633_bases
ATGGGGCTTTGTAGTCGTTATAAAAGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACC
GCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTGGAAG
GTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATATTTTTGTCGATTTTTCAGTAAGCTTTTTACGTCTATTC
CTTGAAAAAGACTGGATTGACTATCTTGCAAGTACTGACATGGGGATTGTTTTAGTCAGCGACCGAAATATGCAATCGTT
AGCTAACTACTGGCGAAAACACAACTCTGCAATATCTGCTGTCATATATAATGATGATGGTCTTGATGTTGCCAATGAAA
AGATCAGACAACTATTTATTGGTCGTTATTTATCATTTACCAGAGGGAACACATTAACTCAGATGGAATTCACCATAATG
GGATATATGGTTTCTGGTTATAATCCATATCAGATTGCTGAAGTTCTGGATATGGATATCCGTAGCATCTACGCGTACAA
GCAACGAATCGAAAAGAGAATGGGTGGTAAAATAAACGAATTATTTATTCGTTCACATTCGGTCCAACATTGA

Upstream 100 bases:

>100_bases
ATCGCAATTTTTCCCGGCAAAATTACAAAATCATGGTGTATTGACATCATCAATAACCAATGAAATTATGCAATTATATA
CGGATAGGGAGGTTCTTAAC

Downstream 100 bases:

>100_bases
TACTCAACAATCTGCCAGAATCATACTCTGCTTATACGGGCATCTATTGAAATGCCCGTATTTTACAAATAAGCAGTAAC
CCCAAGAGTAAACAACATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MGLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEESSYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLF
LEKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFTIM
GYMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMGGKINELFIRSHSVQH

Sequences:

>Translated_210_residues
MGLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEESSYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLF
LEKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFTIM
GYMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMGGKINELFIRSHSVQH
>Mature_209_residues
GLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEESSYFNRGVVEGILTKNHNARLSGYIFVDFSVSFLRLFL
EKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISAVIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFTIMG
YMVSGYNPYQIAEVLDMDIRSIYAYKQRIEKRMGGKINELFIRSHSVQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ykgK [H]

Homologues:

Organism=Escherichia coli, GI87082166, Length=210, Percent_Identity=99.5238095238095, Blast_Score=439, Evalue=1e-125,
Organism=Escherichia coli, GI2367106, Length=172, Percent_Identity=26.1627906976744, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 24386; Mature: 24255

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEESSYFNRGVVEGILTKNH
CCHHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCC
NARLSGYIFVDFSVSFLRLFLEKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISA
CCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCEEEE
VIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFTIMGYMVSGYNPYQIAEVLDMDI
EEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHEEEEEEECCCCHHHHHHHHHHHH
RSIYAYKQRIEKRMGGKINELFIRSHSVQH
HHHHHHHHHHHHHHCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
GLCSRYKSLTCNSCSMHCQIMPEESPRLQYCANSCFCMWPEESSYFNRGVVEGILTKNH
CHHHHHHCCCCCCCCEEEEECCCCCCHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCC
NARLSGYIFVDFSVSFLRLFLEKDWIDYLASTDMGIVLVSDRNMQSLANYWRKHNSAISA
CCEEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCEEEE
VIYNDDGLDVANEKIRQLFIGRYLSFTRGNTLTQMEFTIMGYMVSGYNPYQIAEVLDMDI
EEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEHEEEEEEECCCCHHHHHHHHHHHH
RSIYAYKQRIEKRMGGKINELFIRSHSVQH
HHHHHHHHHHHHHHCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]