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The map label for this gene is yihS

Identifier: 218701420

GI number: 218701420

Start: 3247345

End: 3248529

Strand: Direct

Name: yihS

Synonym: ECIAI39_3120

Alternate gene names: 218701420

Gene position: 3247345-3248529 (Clockwise)

Preceding gene: 218701419

Following gene: 218701421

Centisome position: 63.28

GC content: 54.6

Gene sequence:

>1185_bases
ATGAAATGGTTTAACACCTTAAGTCACAACCGTTGGCTGGAACAGGAAACCGATCGCATCTTTGATTTTGGTAAAAATTC
CGTAGTGCCGACTGGTTTTGGCTGGTTAGGCAATAAAGGGCAAATCAAAGAAGAGATGGGTACCCATCTGTGGATCACCG
CCCGTATGCTGCACGTTTATTCCGTTGCTGCGGCGATGGGTCGACCTGGCGCTTACTCGTTGGTTGATCACGGTATCAAA
GCCATGAACGGCGCACTGTGCGATAAAAAATATGGCGGCTGGTATGCCTGTGTGAATGACGAGGGCGTGGTGGATGCCTC
CAAACAGGGCTATCAACATTTCTTTGCCCTGCTGGGTGCCGCCAGTGCCGTCACAACGGGTCACCCGGAAGCGCGCAAGC
TGCTCGATTACACCATTGAAATTATCGAGAAATACTTCTGGAGCGAAGAAGAGCAGATGTGCCTGGAATCCTGGGACGAA
GCCTTCCTGATTGTCTATGACGTCACGCATGACAAAAAATGGCTGGATCGTGCGATTCGCGTGGCTTCCGTCATTATCCA
CGACGTCGCCAGAAATAATCATTATCGCGTTAACGAGCACTTCGATACCCAGTGGAATCCGCTGCCGGATTACAACAAAG
ATAACCCGGCGCACCGCTTCCGCGCATTCGGAGGCACGCCGGGCCACTGGATCGAGTGGGGTCGTTTAATGCTGCACATC
CATGCCGCCCTGGAAGCCCGCGGCGAACAGCCGCCAGCCTGGCTGTTAGAAGATGCCAAAGGTCTGTTCAACGCCACCGT
GCGCGATGCCTGGGCGCCCGATGGTGCGGACGGGATTGTTTATACCGTTGACTGGGAAGGAAAACCGGTCGTTCGCGAAC
GTGTGCGTTGGCCTATCGTCGAGGCGATGGGTACGGCTTACGCGCTCTACACCGTCACCGGCGATCGCCAGTACGAAACC
TGGTATCAGACATGGTGGGAGTACTGCATTAAGTACCTGATGGACTATGAAAATGGTTCCTGGTGGCAGGAGCTGGATGC
GGACAATAAGGTCACCACCAAAGTCTGGGACGGCAAACAGGATATTTATCACCTGCTGCATTGCCTGGTGATCCCGCGTA
TCCCGTTAGCGCCCGGCATGGCTCCAGCGGTTGCGGCGGGGCTGCTGGACGTGAATGCGAAATAA

Upstream 100 bases:

>100_bases
CGAGTTGATGCTGCGTGACGTTTGCGCACCGAAATTACAACAACTTGGCGATATCGTCGACGAAATGATGGCTAAACGCC
GTTAAGATGGGGATACAAAA

Downstream 100 bases:

>100_bases
CTGAGCTGAAATAACGGCATATCAGGCTACATGCCGGGTATGTCGTTATTCAATAAAGGTGCCTCGTATGCAAATCACCA
ACATGCATTGCAGTGGACAA

Product: putative glucosamine isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAAMGRPGAYSLVDHGIK
AMNGALCDKKYGGWYACVNDEGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDE
AFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFRAFGGTPGHWIEWGRLMLHI
HAALEARGEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVEAMGTAYALYTVTGDRQYET
WYQTWWEYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGMAPAVAAGLLDVNAK

Sequences:

>Translated_394_residues
MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAAMGRPGAYSLVDHGIK
AMNGALCDKKYGGWYACVNDEGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDE
AFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFRAFGGTPGHWIEWGRLMLHI
HAALEARGEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVEAMGTAYALYTVTGDRQYET
WYQTWWEYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGMAPAVAAGLLDVNAK
>Mature_394_residues
MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVYSVAAAMGRPGAYSLVDHGIK
AMNGALCDKKYGGWYACVNDEGVVDASKQGYQHFFALLGAASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDE
AFLIVYDVTHDKKWLDRAIRVASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFRAFGGTPGHWIEWGRLMLHI
HAALEARGEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIVEAMGTAYALYTVTGDRQYET
WYQTWWEYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQDIYHLLHCLVIPRIPLAPGMAPAVAAGLLDVNAK

Specific function: Unknown

COG id: COG2942

COG function: function code G; N-acyl-D-glucosamine 2-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acylglucosamine 2-epimerase family [H]

Homologues:

Organism=Escherichia coli, GI87082342, Length=413, Percent_Identity=94.6731234866828, Blast_Score=801, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR012341
- InterPro:   IPR010819 [H]

Pfam domain/function: PF07221 GlcNAc_2-epim [H]

EC number: 5.-.-.- [C]

Molecular weight: Translated: 45227; Mature: 45227

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS01295 ISPD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVY
CCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCEEEHHHHHHHHH
SVAAAMGRPGAYSLVDHGIKAMNGALCDKKYGGWYACVNDEGVVDASKQGYQHFFALLGA
HHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDEAFLIVYDVTHDKKWLDRAIR
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH
VASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFRAFGGTPGHWIEWGRLMLHI
HHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
HAALEARGEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCCHHH
EAMGTAYALYTVTGDRQYETWYQTWWEYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQ
HHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECCHH
DIYHLLHCLVIPRIPLAPGMAPAVAAGLLDVNAK
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKWFNTLSHNRWLEQETDRIFDFGKNSVVPTGFGWLGNKGQIKEEMGTHLWITARMLHVY
CCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCEEEHHHHHHHHH
SVAAAMGRPGAYSLVDHGIKAMNGALCDKKYGGWYACVNDEGVVDASKQGYQHFFALLGA
HHHHHHCCCCCHHHHHHHHHHHCCHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ASAVTTGHPEARKLLDYTIEIIEKYFWSEEEQMCLESWDEAFLIVYDVTHDKKWLDRAIR
HHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH
VASVIIHDVARNNHYRVNEHFDTQWNPLPDYNKDNPAHRFRAFGGTPGHWIEWGRLMLHI
HHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHH
HAALEARGEQPPAWLLEDAKGLFNATVRDAWAPDGADGIVYTVDWEGKPVVRERVRWPIV
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCCHHH
EAMGTAYALYTVTGDRQYETWYQTWWEYCIKYLMDYENGSWWQELDADNKVTTKVWDGKQ
HHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEEEECCHH
DIYHLLHCLVIPRIPLAPGMAPAVAAGLLDVNAK
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]