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The map label for this gene is frvR

Identifier: 218701402

GI number: 218701402

Start: 3227173

End: 3228921

Strand: Direct

Name: frvR

Synonym: ECIAI39_3101

Alternate gene names: 218701402

Gene position: 3227173-3228921 (Clockwise)

Preceding gene: 218701401

Following gene: 218701405

Centisome position: 62.88

GC content: 48.71

Gene sequence:

>1749_bases
ATGCTAAACGAACGCCAGTTAAAGATTGTCGATCTGCTGGAGCAACAGCCACGCACGCCTGGCGAGCTGGCGCAACAGAC
TGGCGTTTCCGGCAGGACCATCCTGCGTGATATTGACTATCTCAACTTTACCCTCAACGGCAAAGCCCGCATCACTACCA
GCGGCAGCGCGGGCTACCAACTGGAAATTTTTGAGCGTCGCAGCTTTTTTCAGTTGCTGCAAAAGCACGATAACGACGAT
CGGCTGCTGGCGCTGTTATTACTGAATACTTTCACTCCCCGTGCGCAACTCGCCTCGGCGCTTAATTTGCCAGAAACGTG
GGTAGCAGAGCGCCTGCCCCGCCTGAAACAGCGCTATGAACGCGGTTTTTGTCTCGCTAGTCGCCCTGGTTTGGGCCATT
TCATTGATGAGACAGAAGAGAAACGCATTATTTTGCTGGCGAATCTTTTACGCAAAGATCCGTTTTTAATTCCGCTGTCG
GGAGTAACACGAGACAATTTTCAACAATTAACCACCGCCTGCGAAAAGCAACGTCGCTGGCCGCTGATGCAAAGCGACTA
TCTCTCAAGCCTGATTCTGGCTATTTACGCGTTGCGTAATCAGCTTACTGACACATGGCCTGAATATCCCGGTAGCGAGA
TAAAACAGATCGTTGAATATAGCGGCCTGTTTCTTGGTGATAACGCTGTAAGAACGTTGACGGGGTTGATAGAAAAACAG
CATCAACAGGCGCAGGTTATTTGTGTCGATAATGTGCTGGCATTGCTGCAAAGGGTGCCGGGCATTGCGTCATTGAATAT
TATTGATACGCAACTGGTTGAGAATATTACCGGGCATTTATTACGTTGCCTTGCCGCGCCGGTGTGGATTGGAGAGCACC
GCCAAAGCAGCATGAATACCCTGAAAGCCGCCTGGCCTGCGGCCTTTGATATGAGTCTGCACTTTATTACGCTACTGCGT
GAACAACTCGATATTCCCCTTTTCGACAGCGATCTGATTGGTTTGTATTTTGCCTGTGCGCTGGAACGGCATCAAAACGA
ACGCCAGCCGATCATTTTGTTGTCTGATCAGAATGCAATTGCCACCATTAATCAGCTCGCCATTGAGCGCGATGTTTTAC
ATTGTCGGGTGATTATTGCCCGTAGCTTAAGCGAACTTGTTGCCATTCGCGAAGAGATTGAGCCGTTATTGATCATTAAC
AACAGCCATTATTTACTGGATGACGCGGTAAATAATTACATCACCGTAAAAAATATCATTACGGCTGCCGGTATCGAACA
AATAAAACATTTTCTGGCGACGGCATTTATTCGCCAGCAACCGGAGCGTTTTTTCTCTGCCCCCGGAAGTTTTCATTATT
CGAATGTACGCGGTGAAAGCTGGCAACATATTACCCGGCAAATTTGTGCTCAATTAGTCGCACAACACCATATTACCGCC
GATGAAGCGCAACGGATCATCGCCCGCGAAGGCGAAGGTGAAAACCTGATTGTTAATCGCCTCGCCATCCCACATTGCTG
GAGCGAACAGGAGCGACGTTTTCGTGGATTTTTTATTACCCTCGCCCAATCAGTTGAGGTGAATAACGAAGTCGTTAACC
ATGTTTTGATCGCCTGCGCCGCCGCCGATGCGCGTCATGAGCTAAAAATATTTAGCTATCTGGCAAGCGTATTGTGTCAG
CATCCGGCAGAGGTTATTGCCGGGTTAACAGGATATGAGGCATTTATGGAGTTACTTCACAAGGGGTGA

Upstream 100 bases:

>100_bases
AAGCCGATTACGATGCTCTGCTCACGTTGATAAAGGATTTTCTGACCACCTTAACCGCGGAGAAAGTCAACGCGTTTAGC
CAGTTCCGTCAGGTGGATTA

Downstream 100 bases:

>100_bases
ACTGTGTCGGATGCGCCGCATCCGACACTGCATTTATCATCAAAAACGTTTAACGCAGGCGATTATAATCATCGACCATT
TCGTTGTACTCGCGTAATGC

Product: putative frv operon regulatory protein

Products: NA

Alternate protein names: Putative phosphotransferase EIIA component; Putative PTS system EIIA component [H]

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARITTSGSAGYQLEIFERRSFFQLLQKHDNDD
RLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERGFCLASRPGLGHFIDETEEKRIILLANLLRKDPFLIPLS
GVTRDNFQQLTTACEKQRRWPLMQSDYLSSLILAIYALRNQLTDTWPEYPGSEIKQIVEYSGLFLGDNAVRTLTGLIEKQ
HQQAQVICVDNVLALLQRVPGIASLNIIDTQLVENITGHLLRCLAAPVWIGEHRQSSMNTLKAAWPAAFDMSLHFITLLR
EQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLHCRVIIARSLSELVAIREEIEPLLIIN
NSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA
DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQSVEVNNEVVNHVLIACAAADARHELKIFSYLASVLCQ
HPAEVIAGLTGYEAFMELLHKG

Sequences:

>Translated_582_residues
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARITTSGSAGYQLEIFERRSFFQLLQKHDNDD
RLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERGFCLASRPGLGHFIDETEEKRIILLANLLRKDPFLIPLS
GVTRDNFQQLTTACEKQRRWPLMQSDYLSSLILAIYALRNQLTDTWPEYPGSEIKQIVEYSGLFLGDNAVRTLTGLIEKQ
HQQAQVICVDNVLALLQRVPGIASLNIIDTQLVENITGHLLRCLAAPVWIGEHRQSSMNTLKAAWPAAFDMSLHFITLLR
EQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLHCRVIIARSLSELVAIREEIEPLLIIN
NSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA
DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQSVEVNNEVVNHVLIACAAADARHELKIFSYLASVLCQ
HPAEVIAGLTGYEAFMELLHKG
>Mature_582_residues
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARITTSGSAGYQLEIFERRSFFQLLQKHDNDD
RLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERGFCLASRPGLGHFIDETEEKRIILLANLLRKDPFLIPLS
GVTRDNFQQLTTACEKQRRWPLMQSDYLSSLILAIYALRNQLTDTWPEYPGSEIKQIVEYSGLFLGDNAVRTLTGLIEKQ
HQQAQVICVDNVLALLQRVPGIASLNIIDTQLVENITGHLLRCLAAPVWIGEHRQSSMNTLKAAWPAAFDMSLHFITLLR
EQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLHCRVIIARSLSELVAIREEIEPLLIIN
NSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA
DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQSVEVNNEVVNHVLIACAAADARHELKIFSYLASVLCQ
HPAEVIAGLTGYEAFMELLHKG

Specific function: Could be involved in the regulation of the transcription of the FRV operon [H]

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PTS EIIA type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1790331, Length=582, Percent_Identity=94.8453608247423, Blast_Score=1120, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR016152
- InterPro:   IPR002178
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11; PF00359 PTS_EIIA_2 [H]

EC number: NA

Molecular weight: Translated: 66105; Mature: 66105

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS51094 PTS_EIIA_TYPE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARITTSGSAGYQ
CCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCEEEEEECCCEEEEECCCCCEE
LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE
EEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
RGFCLASRPGLGHFIDETEEKRIILLANLLRKDPFLIPLSGVTRDNFQQLTTACEKQRRW
CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCC
PLMQSDYLSSLILAIYALRNQLTDTWPEYPGSEIKQIVEYSGLFLGDNAVRTLTGLIEKQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEECCHHHHHHHHHHHHH
HQQAQVICVDNVLALLQRVPGIASLNIIDTQLVENITGHLLRCLAAPVWIGEHRQSSMNT
HHHHHEEEHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHH
ATINQLAIERDVLHCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHCCEEEHHHHH
TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA
HHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCH
DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQSVEVNNEVVNHVLIACA
HHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHH
AADARHELKIFSYLASVLCQHPAEVIAGLTGYEAFMELLHKG
HHCCHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARITTSGSAGYQ
CCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHCCEEEEEECCCEEEEECCCCCEE
LEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYE
EEEHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
RGFCLASRPGLGHFIDETEEKRIILLANLLRKDPFLIPLSGVTRDNFQQLTTACEKQRRW
CCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHCC
PLMQSDYLSSLILAIYALRNQLTDTWPEYPGSEIKQIVEYSGLFLGDNAVRTLTGLIEKQ
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCEEECCHHHHHHHHHHHHH
HQQAQVICVDNVLALLQRVPGIASLNIIDTQLVENITGHLLRCLAAPVWIGEHRQSSMNT
HHHHHEEEHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAI
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHH
ATINQLAIERDVLHCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNII
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEHHHHCCEEEHHHHH
TAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITA
HHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHCCCH
DEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQSVEVNNEVVNHVLIACA
HHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHH
AADARHELKIFSYLASVLCQHPAEVIAGLTGYEAFMELLHKG
HHCCHHHHHHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503; 8019415 [H]