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The map label for this gene is wzzE

Identifier: 218701301

GI number: 218701301

Start: 3111130

End: 3112176

Strand: Reverse

Name: wzzE

Synonym: ECIAI39_3002

Alternate gene names: 218701301

Gene position: 3112176-3111130 (Counterclockwise)

Preceding gene: 218701302

Following gene: 218701300

Centisome position: 60.64

GC content: 52.34

Gene sequence:

>1047_bases
ATGACACAACCAATGCCTGGGAAACCGGCCGAAGACGCTGAAAATGAACTGGATATTCGTGGGTTGTTTCGTACCTTGTG
GGCTGGGAAGCTGTGGATTATTGGCATGGGGCTGGTGTTTGCGTTAATCGCGCTGGCGTATACTTTTTTTGCTCGCCAGG
AGTGGAGCTCGACAGCGATTACCGATCGTCCAACGGTGAATATGCTGGGGGGATATTACTCACAGCAGCAATTTTTGCGT
AACCTGGATGTCCGTTCAAACATGGCTTCTGCCGACCAACCATCGGTCATGGACGAAGCCTATAAAGAGTTTGTTATGCA
ACTGGCCTCGTGGGATACCCGCAGAGAGTTCTGGCTGCAAACCGACTATTACAAACAGCGGATGGTGGGCAATAGCAAAG
CCGATGCGGCGTTGCTGGATGAAATGATCAACAACATCGTGTTTATTCCCGGTGACTTCACCCGCGCGGTCAATGACAGC
GTGAAGCTGATTGCCGAAACTGCGCCTGACGCTAATAACCTGTTACGTCAGTATGTTGCTTTTGCCAGCCAGCGTGCAGC
CAGCCATCTGAATGATGAGCTGAAAGGCGCATGGGCGGCACGCACCATCCAGATGAAAGCTCAGGTGAAGCGTCAGGAAG
AGGTGGCGAAAGCTATCTACGATCGCCGGATGAACAGTATTGAACAGGCGCTGAAAATTGCTGAGCAGCATAATATTTCG
CGCAGTGCGACAGATGTGCCTGCCGAGGAATTACCTGATTCAGAAATGTTCCTGCTTGGGCGTCCAATGCTCCAGGCTCG
ACTGGAAAATTTACAGGCCGTCGGTCCGGCCTTTGATCTCGACTATGATCAGAATCGGGCCATGTTAAACACCCTGAATG
TTGGTCCAACCCTGGATCCGCGTTTTCAGACCTATCGCTATTTGCGTACGCCGGAAGAACCGGTAAAACGCGATAGCCCA
CGTCGTGCCTTCCTGATGATTATGTGGGGCATTGTCGGGGGGCTGATCGGGGCTGGTGTCGCATTAACCCGCCGTTGCTC
GAAATAG

Upstream 100 bases:

>100_bases
AGCGTGCCTGGAAAGTTGCTCGCTTTATTAAGCGCGTAAAACGCAGACTGCGTAGAAATCGTGGTGGCAGCCCCAATTTA
ACCAAATAAATGAGGATGTG

Downstream 100 bases:

>100_bases
CAACACTGCTGCGGTGAGCGCAAAGGCGCTCGCCGCTTATTCGAAGAGAATCGATGTGAAAGTACTGACTGTATTTGGTA
CGCGCCCGGAAGCCATCAAG

Product: lipopolysaccharide biosynthesis protein WzzE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLVFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLR
NLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIVFIPGDFTRAVNDS
VKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS
RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSP
RRAFLMIMWGIVGGLIGAGVALTRRCSK

Sequences:

>Translated_348_residues
MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLVFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLR
NLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIVFIPGDFTRAVNDS
VKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS
RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSP
RRAFLMIMWGIVGGLIGAGVALTRRCSK
>Mature_347_residues
TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLVFALIALAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRN
LDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIVFIPGDFTRAVNDSV
KLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNISR
SATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPR
RAFLMIMWGIVGGLIGAGVALTRRCSK

Specific function: Unknown

COG id: COG3765

COG function: function code M; Chain length determinant protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the wzzB/cld/rol family [H]

Homologues:

Organism=Escherichia coli, GI87082332, Length=348, Percent_Identity=99.4252873563218, Blast_Score=713, Evalue=0.0,
Organism=Escherichia coli, GI87082029, Length=338, Percent_Identity=25.1479289940828, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1786802, Length=364, Percent_Identity=21.1538461538462, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003856 [H]

Pfam domain/function: PF02706 Wzz [H]

EC number: NA

Molecular weight: Translated: 39489; Mature: 39357

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLVFALIALAYTFFARQEWSSTAI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
TDYYKQRMVGNSKADAALLDEMINNIVFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA
HHHHHHHHCCCCCHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP
CCCCCCCHHHCCCCCEEHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCC
RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK
HHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLVFALIALAYTFFARQEWSSTAI
CCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYKEFVMQLASWDTRREFWLQ
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
TDYYKQRMVGNSKADAALLDEMINNIVFIPGDFTRAVNDSVKLIAETAPDANNLLRQYVA
HHHHHHHHCCCCCHHHHHHHHHHHCEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
FASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKAIYDRRMNSIEQALKIAEQHNIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGPAFDLDYDQNRAMLNTLNVGPTLDP
CCCCCCCHHHCCCCCEEHHCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCC
RFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGGLIGAGVALTRRCSK
HHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]