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The map label for this gene is ygcQ

Identifier: 218701253

GI number: 218701253

Start: 3054633

End: 3055493

Strand: Reverse

Name: ygcQ

Synonym: ECIAI39_2951

Alternate gene names: 218701253

Gene position: 3055493-3054633 (Counterclockwise)

Preceding gene: 218701254

Following gene: 218701248

Centisome position: 59.54

GC content: 54.94

Gene sequence:

>861_bases
ATGAATATCGCAATTGTGACAATAAATCAGGAGAATGCCGCAATAGCGAGCTGGCTGGCGGCGCAGGATTTCAGCGGTTG
TACTCTGGCGCACTGGCAGATTGAACCTCAGCCCGTAGTGGCGGAACAGGTGCTGGATGCGTTGGTGGAACAGTGGCAGC
GAACGCCTGCGGACGTTGTTCTCTTTCCGCCGGGAACGTTTGGCGATGAACTGTCGACACGGCTGGCCTGGCGTTTACAT
GGTGCAAGCATTTGCCAGGTGACTTCATTAGATATTCCAACCGTAAACGTACGCAAATCCCACTGGGGAAATGCGCTAAC
GGCGACGCTGCAAACAGAAAAACGCCCGCTATGCCTTTCCCTTGCCCGCCAGGCGGGAGCAGTGAAAAACGCCACATTGC
CCTCTGGTATGCAGCAACTGAACATTGTCCCCGGCGCGCTTCCCGACTGGCTGGTTAGCACAGAGGATCTGAAAAATGTT
ACCCGTGACCCATTAGCTGAGGCCAGACGGGTGCTGGTGGTGGGGCAGGGCGGAGAGGCAGATAACCAGGAAATCGCTAT
GCTGGCAGAAAAGCTGGGAGCCGAAGTGGGCTACAGTCGGGCGCGAGTAATGAACGGTGGCGTTGATGCCGAAAAAGTGA
TTGGTATTTCCGGACATCTGCTGGCACCTGAGGTGTGTATTGTTGTTGGCGCTTCTGGCGCAGCAGCGTTAATGGCGGGC
GTATGCAATAGCAAGTTTGTGGTGGCGATTAATCATGACGCCAGCGCAGCGATATTTTCACAGGCAGATGTTGGCGTGGT
TGATGACTGGAAAGCGGTGCTGGAGGCACTGGTGACAAACATTCACGCAGATTGCCAATAA

Upstream 100 bases:

>100_bases
GGCCAGAGCAACGACGCAGAGCGGCGCTGATTGATGGGCAAACGGTAGCAGAAAAAGCGCAAAAGCTATGGCAGGACTAT
TTACGCCAAAGGATGCAGCC

Downstream 100 bases:

>100_bases
CGTGTTGCCGGATGATCCTGCCTACGGTTCTGGCCTGGGTACTTGTAGGCCTGATAAGACGCGTCAAGCGTCGCATCAGG
CGCTGAATGTCGGATGTGGC

Product: putative flavoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLH
GASICQVTSLDIPTVNVRKSHWGNALTATLQTEKRPLCLSLARQAGAVKNATLPSGMQQLNIVPGALPDWLVSTEDLKNV
TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAG
VCNSKFVVAINHDASAAIFSQADVGVVDDWKAVLEALVTNIHADCQ

Sequences:

>Translated_286_residues
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLH
GASICQVTSLDIPTVNVRKSHWGNALTATLQTEKRPLCLSLARQAGAVKNATLPSGMQQLNIVPGALPDWLVSTEDLKNV
TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAG
VCNSKFVVAINHDASAAIFSQADVGVVDDWKAVLEALVTNIHADCQ
>Mature_286_residues
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLH
GASICQVTSLDIPTVNVRKSHWGNALTATLQTEKRPLCLSLARQAGAVKNATLPSGMQQLNIVPGALPDWLVSTEDLKNV
TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAG
VCNSKFVVAINHDASAAIFSQADVGVVDDWKAVLEALVTNIHADCQ

Specific function: May play a role in a redox process [H]

COG id: COG2025

COG function: function code C; Electron transfer flavoprotein, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF alpha-subunit/fixB family [H]

Homologues:

Organism=Homo sapiens, GI189181759, Length=214, Percent_Identity=34.1121495327103, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4503607, Length=214, Percent_Identity=34.1121495327103, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI87082157, Length=286, Percent_Identity=98.2517482517483, Blast_Score=568, Evalue=1e-163,
Organism=Escherichia coli, GI1787990, Length=236, Percent_Identity=30.9322033898305, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1786226, Length=117, Percent_Identity=39.3162393162393, Blast_Score=67, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17506929, Length=220, Percent_Identity=36.3636363636364, Blast_Score=88, Evalue=5e-18,
Organism=Saccharomyces cerevisiae, GI6325261, Length=224, Percent_Identity=29.9107142857143, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI17136898, Length=222, Percent_Identity=33.7837837837838, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24652801, Length=222, Percent_Identity=33.7837837837838, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001308
- InterPro:   IPR014730
- InterPro:   IPR014731
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF; PF00766 ETF_alpha [H]

EC number: NA

Molecular weight: Translated: 30296; Mature: 30296

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVV
CEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEE
LFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVNVRKSHWGNALTATLQTEKRPLCLS
EECCCCCCHHHHHHHEEEECCCEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCCHHHH
LARQAGAVKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEA
HHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHCCCHHHHHHHCCHHHHCCEEEEEECCCCC
DNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAG
CCHHHHHHHHHHCHHCCCCHHEEECCCCCHHHEEECCCCEECCEEEEEEECCCHHHHHHH
VCNSKFVVAINHDASAAIFSQADVGVVDDWKAVLEALVTNIHADCQ
HCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQVLDALVEQWQRTPADVV
CEEEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEE
LFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVNVRKSHWGNALTATLQTEKRPLCLS
EECCCCCCHHHHHHHEEEECCCEEEEEEECCCCEEEEECCCCCCEEEEEEECCCCCHHHH
LARQAGAVKNATLPSGMQQLNIVPGALPDWLVSTEDLKNVTRDPLAEARRVLVVGQGGEA
HHHHCCCCCCCCCCCCHHHHCCCCCCCCHHHCCCHHHHHHHCCHHHHCCEEEEEECCCCC
DNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISGHLLAPEVCIVVGASGAAALMAG
CCHHHHHHHHHHCHHCCCCHHEEECCCCCHHHEEECCCCEECCEEEEEEECCCHHHHHHH
VCNSKFVVAINHDASAAIFSQADVGVVDDWKAVLEALVTNIHADCQ
HCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]