| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is bsdD [H]
Identifier: 218701228
GI number: 218701228
Start: 3032749
End: 3032985
Strand: Reverse
Name: bsdD [H]
Synonym: ECIAI39_2925
Alternate gene names: 218701228
Gene position: 3032985-3032749 (Counterclockwise)
Preceding gene: 218701229
Following gene: 218701225
Centisome position: 59.1
GC content: 55.7
Gene sequence:
>237_bases ATGATTTGTCCACGTTGTGCCGATGAACAGATTGAAGTGATGGCGAAATCGCCGGTAAAAGATGTCTGGACGGTCTACCA GTGCCAGCATTGCCTCTATACCTGGCGCGATACCGAACCGCTGCGCCGCACCAGCCGCGAACATTATCCCGAAGCGTTCC GCATGACGCAGAAAGATATTGATGACGCGCCGATGGTGCCGAGCATCCCGCCGCTGCTGGCGGAAGGTAAGTGTTAA
Upstream 100 bases:
>100_bases CGTGGTCACTACAGCCAGCCGGTGGTGGATTTACCGGAAACCAAAGCCTGGGCTGAAAAACTGACCGCTATGCTGGCCGC ACGTCAATAAGGAGAACAAG
Downstream 100 bases:
>100_bases TAAAAAAGTGCCGGGTAGAGGCTTTGCTTTACCCGGCCACGTTATTTAATTTTATAAAACGATAACCGTCTGCTTTCCGG CGAGCCGGTATCAATATAAA
Product: putative non-oxidative hydroxyarylic acid decarboxylase
Products: NA
Alternate protein names: PAD; 4-hydroxybenzoate decarboxylase subunit D; 4-hydroxybenzoate DC; Phenylacrylic acid decarboxylase subunit D; Vanillate decarboxylase subunit D [H]
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MICPRCADEQIEVMAKSPVKDVWTVYQCQHCLYTWRDTEPLRRTSREHYPEAFRMTQKDIDDAPMVPSIPPLLAEGKC
Sequences:
>Translated_78_residues MICPRCADEQIEVMAKSPVKDVWTVYQCQHCLYTWRDTEPLRRTSREHYPEAFRMTQKDIDDAPMVPSIPPLLAEGKC >Mature_78_residues MICPRCADEQIEVMAKSPVKDVWTVYQCQHCLYTWRDTEPLRRTSREHYPEAFRMTQKDIDDAPMVPSIPPLLAEGKC
Specific function: Part of the BsdBCD complex involved in the decarboxylation and detoxification of phenolic derivatives under both aerobic and anaerobic conditions. It is able to catalyze the reversible decarboxylation of 4-hydroxybenzoate, vanillate and salicylate. Is not
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: =4.1.1.61 [H]
Molecular weight: Translated: 9127; Mature: 9127
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 6.4 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 11.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICPRCADEQIEVMAKSPVKDVWTVYQCQHCLYTWRDTEPLRRTSREHYPEAFRMTQKDI CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCC DDAPMVPSIPPLLAEGKC CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MICPRCADEQIEVMAKSPVKDVWTVYQCQHCLYTWRDTEPLRRTSREHYPEAFRMTQKDI CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHCC DDAPMVPSIPPLLAEGKC CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377 [H]