| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is ydfG [H]
Identifier: 218701167
GI number: 218701167
Start: 2969488
End: 2969919
Strand: Direct
Name: ydfG [H]
Synonym: ECIAI39_2862
Alternate gene names: 218701167
Gene position: 2969488-2969919 (Clockwise)
Preceding gene: 218701165
Following gene: 218701168
Centisome position: 57.86
GC content: 52.31
Gene sequence:
>432_bases ATGACTACATTACGTCAGCCTTACTACGAACTTAGCCCGGCAGTGTATAACGCACTAGTGCAGGCCAAAACGGCACTGGA AAATAGCACGCTGGATACCACGTTGATGGAGTTAGTTTATTTGCGCGTCTCGCAAATCAACGGCTGCGCATTTTGTCTGG AGATGCACAGCAAAGCATTGCGCAAATCCGGCGTGCCACAGCACAAACTGGACGCCCTGGCAGGTTGGCGCGTAAGCCAT CATTTTGATGAACGCGAGCGGGCGGCGCTGGCATGGGCGGAATCGGTAACCGAAATTGCCAGAACCCATGCGGAAGACGA GGTTTATCAGCCTTTGCTTGAGCATTTCAGCGCAGCAGAGATCAGCGACTTAACGTTTGCCATCGGGCTGATGAATTGTT TTAACCGTCTGGCCGTTTCCATGCGGATGTAA
Upstream 100 bases:
>100_bases GATAGCGCGGCATATGGTCTGCTTTTTTAGGTAATTTATGGCTCTCTTTAACAGTCCATTATAGTGCTACATTGCGGGCG TTAATAAGAGGAGAAACTGT
Downstream 100 bases:
>100_bases CTTTTTGATGCCGGGTATTCGCCCGGCAAAAAAACACAAAATCCCCTACCCCGTTGAGCCATTCATCGGTGGCGTAATCA ATCTAAAATTCCCATATCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTTLRQPYYELSPAVYNALVQAKTALENSTLDTTLMELVYLRVSQINGCAFCLEMHSKALRKSGVPQHKLDALAGWRVSH HFDERERAALAWAESVTEIARTHAEDEVYQPLLEHFSAAEISDLTFAIGLMNCFNRLAVSMRM
Sequences:
>Translated_143_residues MTTLRQPYYELSPAVYNALVQAKTALENSTLDTTLMELVYLRVSQINGCAFCLEMHSKALRKSGVPQHKLDALAGWRVSH HFDERERAALAWAESVTEIARTHAEDEVYQPLLEHFSAAEISDLTFAIGLMNCFNRLAVSMRM >Mature_142_residues TTLRQPYYELSPAVYNALVQAKTALENSTLDTTLMELVYLRVSQINGCAFCLEMHSKALRKSGVPQHKLDALAGWRVSHH FDERERAALAWAESVTEIARTHAEDEVYQPLLEHFSAAEISDLTFAIGLMNCFNRLAVSMRM
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788050, Length=115, Percent_Identity=33.9130434782609, Blast_Score=62, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004675 - InterPro: IPR003779 [H]
Pfam domain/function: PF02627 CMD [H]
EC number: NA
Molecular weight: Translated: 16175; Mature: 16044
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLRQPYYELSPAVYNALVQAKTALENSTLDTTLMELVYLRVSQINGCAFCLEMHSKAL CCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RKSGVPQHKLDALAGWRVSHHFDERERAALAWAESVTEIARTHAEDEVYQPLLEHFSAAE HHCCCCHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHH ISDLTFAIGLMNCFNRLAVSMRM HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTLRQPYYELSPAVYNALVQAKTALENSTLDTTLMELVYLRVSQINGCAFCLEMHSKAL CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH RKSGVPQHKLDALAGWRVSHHFDERERAALAWAESVTEIARTHAEDEVYQPLLEHFSAAE HHCCCCHHHHHHHHCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHH ISDLTFAIGLMNCFNRLAVSMRM HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]