| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
Click here to switch to the map view.
The map label for this gene is 218700994
Identifier: 218700994
GI number: 218700994
Start: 2778885
End: 2780360
Strand: Reverse
Name: 218700994
Synonym: ECIAI39_2684
Alternate gene names: NA
Gene position: 2780360-2778885 (Counterclockwise)
Preceding gene: 218700995
Following gene: 218700991
Centisome position: 54.18
GC content: 54.07
Gene sequence:
>1476_bases GTGACAGATACAGCGTTATCTCCTGAAGAGCAGTTGATCGATGATATTGCAGGGTTCACTCACGATCCGCTTGGCTATGC CCTCTATGCGTTCCCGTGGGGGGAAGAGGGGACTGAACTGGCACATGCTACCGGCCCACGTCAGTGGCAGGCTGATGCGT TCCGAGAGATACGTGATCACCTGCAGAATCCAGAGACGCGCTATCAGCCGCTTATGCTGGCACGCGCTTCTGGTCACGGT ATTGGTAAATCCGCATTCATCTCAATGCTGATCAACTGGGGCATGTCCACTTGCGAGGATTGTAAGGTCGTGGTGACCGC CAACACCGACAACCAGCTACGAACGAAGACCTGGCCGGAAATTATCAAGTGGTCGAACCTTGCTATCACGAAAGACTGGT TTACCTGTACCGCTACCGCGATGTACAGCAATGATCCTGGACACGACAAGCGGTGGCGAGCTGACGCAATCCCCTGGTCT GAGCACAACACTGAGGCATTCGCCGGACTACACAACGAGCGCAAACGCATCATCGTGGTATTCGATGAAGCGTCGAACAT TGCGGATCTGGTGTGGGAAGTTGCCGAGGGTGCACTAACGGACGAAGACACTGAGATTATCTGGGTGGCGTTCGGAAACC CGACGCGTAATACCGGACGTTTCCGCGAATGTTTCCGCAAATATAAACACCGCTGGAAAACTGCGCAGATTGACAGCCGA ACGGTGGAAGGCACTAACAAACAGCAGTTGCAGAAATGGGTTGATGACTACGGGGAAGACAGCGACTTCGTTAAAATCCG TGTGCGCGGCATATTCCCTGATGCATCTGAATTGCAGTTTATCCCTACCGGTCTTACTGATGAGGCAATGAAACGGGTGG TAACCGCTGCGCAGGTGGCGCATGCTCCGGTGATAATCGGCGTTGACCCTGCATACTCCGGTGTTGATGACGCGGTGATA TACCTGCGGCAGGGGCTGCACAGTAAGGTGCTGTGGACCGGCAACAAGACCACTGACGATCTGATTATGGCAAAGCGTAT CGCTGACTTTGAAGACCAGTATCAGGCTGACGCGGTGTTCATCGACTTCGGTTACGGAACTGGTCTGAAGTCAATCGGTG ACGGTTGGGGGCGCACATGGCAACTTGTTCCGTTCGGTGGCGCGTCTACTGACCCGCAGATGCTCAACAAGCGTGGGGAG ATGTTCAACTCATGCAAGACATGGCTGAGGCTGGGCGGCATGCTGGATGACCAGGAAACAGCGGACGACCTGTCGGCGGC AGAGTACAAAGTTCGAGTGGACGGTAAAATCGTTATCGAACCGAAGGAAGATATCAAGGAGCGGCTTGGGCGTTCGCCGG GTAAAGGCGATGCGCTACTGCTGACGTTTGCTTTCCCGGTCTCGAAACGCATAAATATACCAGGACAGCAAAGCCAGCAG GGAAGGGCCATTACAGATTACGATCCCTATGCTTAA
Upstream 100 bases:
>100_bases ACGCGTTCAAAGAACGTCTGGATGTTAATGTGAATGTGACAATTGCTGATCGCATAGCAGCAGCCAGGAAGCGACTCAAA GAACGTCAGGATGGTAATCA
Downstream 100 bases:
>100_bases TCCGCTGCTGGGGATAATGTCGTTGATATCCTCTGATGAGGATAAAATAAAGCCCGCCAAATGCGCGGGCTTTATTTTTA AATAATTATTTCTTGATAAT
Product: putative phage terminase, large subunit
Products: NA
Alternate protein names: Terminase Large Subunit; Terminase B Protein; PBSX Family Phage Terminase Large Subunit; Ppx/GppA Family Phosphatase
Number of amino acids: Translated: 491; Mature: 490
Protein sequence:
>491_residues MTDTALSPEEQLIDDIAGFTHDPLGYALYAFPWGEEGTELAHATGPRQWQADAFREIRDHLQNPETRYQPLMLARASGHG IGKSAFISMLINWGMSTCEDCKVVVTANTDNQLRTKTWPEIIKWSNLAITKDWFTCTATAMYSNDPGHDKRWRADAIPWS EHNTEAFAGLHNERKRIIVVFDEASNIADLVWEVAEGALTDEDTEIIWVAFGNPTRNTGRFRECFRKYKHRWKTAQIDSR TVEGTNKQQLQKWVDDYGEDSDFVKIRVRGIFPDASELQFIPTGLTDEAMKRVVTAAQVAHAPVIIGVDPAYSGVDDAVI YLRQGLHSKVLWTGNKTTDDLIMAKRIADFEDQYQADAVFIDFGYGTGLKSIGDGWGRTWQLVPFGGASTDPQMLNKRGE MFNSCKTWLRLGGMLDDQETADDLSAAEYKVRVDGKIVIEPKEDIKERLGRSPGKGDALLLTFAFPVSKRINIPGQQSQQ GRAITDYDPYA
Sequences:
>Translated_491_residues MTDTALSPEEQLIDDIAGFTHDPLGYALYAFPWGEEGTELAHATGPRQWQADAFREIRDHLQNPETRYQPLMLARASGHG IGKSAFISMLINWGMSTCEDCKVVVTANTDNQLRTKTWPEIIKWSNLAITKDWFTCTATAMYSNDPGHDKRWRADAIPWS EHNTEAFAGLHNERKRIIVVFDEASNIADLVWEVAEGALTDEDTEIIWVAFGNPTRNTGRFRECFRKYKHRWKTAQIDSR TVEGTNKQQLQKWVDDYGEDSDFVKIRVRGIFPDASELQFIPTGLTDEAMKRVVTAAQVAHAPVIIGVDPAYSGVDDAVI YLRQGLHSKVLWTGNKTTDDLIMAKRIADFEDQYQADAVFIDFGYGTGLKSIGDGWGRTWQLVPFGGASTDPQMLNKRGE MFNSCKTWLRLGGMLDDQETADDLSAAEYKVRVDGKIVIEPKEDIKERLGRSPGKGDALLLTFAFPVSKRINIPGQQSQQ GRAITDYDPYA >Mature_490_residues TDTALSPEEQLIDDIAGFTHDPLGYALYAFPWGEEGTELAHATGPRQWQADAFREIRDHLQNPETRYQPLMLARASGHGI GKSAFISMLINWGMSTCEDCKVVVTANTDNQLRTKTWPEIIKWSNLAITKDWFTCTATAMYSNDPGHDKRWRADAIPWSE HNTEAFAGLHNERKRIIVVFDEASNIADLVWEVAEGALTDEDTEIIWVAFGNPTRNTGRFRECFRKYKHRWKTAQIDSRT VEGTNKQQLQKWVDDYGEDSDFVKIRVRGIFPDASELQFIPTGLTDEAMKRVVTAAQVAHAPVIIGVDPAYSGVDDAVIY LRQGLHSKVLWTGNKTTDDLIMAKRIADFEDQYQADAVFIDFGYGTGLKSIGDGWGRTWQLVPFGGASTDPQMLNKRGEM FNSCKTWLRLGGMLDDQETADDLSAAEYKVRVDGKIVIEPKEDIKERLGRSPGKGDALLLTFAFPVSKRINIPGQQSQQG RAITDYDPYA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55212; Mature: 55081
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTALSPEEQLIDDIAGFTHDPLGYALYAFPWGEEGTELAHATGPRQWQADAFREIRDH CCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHH LQNPETRYQPLMLARASGHGIGKSAFISMLINWGMSTCEDCKVVVTANTDNQLRTKTWPE HCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHH IIKWSNLAITKDWFTCTATAMYSNDPGHDKRWRADAIPWSEHNTEAFAGLHNERKRIIVV HHCCCCEEEEECCEEEEEEEEECCCCCCCCCEECCCCCCCCCCCHHHHCCCCCCCEEEEE FDEASNIADLVWEVAEGALTDEDTEIIWVAFGNPTRNTGRFRECFRKYKHRWKTAQIDSR ECCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC TVEGTNKQQLQKWVDDYGEDSDFVKIRVRGIFPDASELQFIPTGLTDEAMKRVVTAAQVA CCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHH HAPVIIGVDPAYSGVDDAVIYLRQGLHSKVLWTGNKTTDDLIMAKRIADFEDQYQADAVF CCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCHHHCCCCCEEE IDFGYGTGLKSIGDGWGRTWQLVPFGGASTDPQMLNKRGEMFNSCKTWLRLGGMLDDQET EECCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ADDLSAAEYKVRVDGKIVIEPKEDIKERLGRSPGKGDALLLTFAFPVSKRINIPGQQSQQ HHHHCCCEEEEEECCEEEECCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC GRAITDYDPYA CCEECCCCCCC >Mature Secondary Structure TDTALSPEEQLIDDIAGFTHDPLGYALYAFPWGEEGTELAHATGPRQWQADAFREIRDH CCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHH LQNPETRYQPLMLARASGHGIGKSAFISMLINWGMSTCEDCKVVVTANTDNQLRTKTWPE HCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCHH IIKWSNLAITKDWFTCTATAMYSNDPGHDKRWRADAIPWSEHNTEAFAGLHNERKRIIVV HHCCCCEEEEECCEEEEEEEEECCCCCCCCCEECCCCCCCCCCCHHHHCCCCCCCEEEEE FDEASNIADLVWEVAEGALTDEDTEIIWVAFGNPTRNTGRFRECFRKYKHRWKTAQIDSR ECCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC TVEGTNKQQLQKWVDDYGEDSDFVKIRVRGIFPDASELQFIPTGLTDEAMKRVVTAAQVA CCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHH HAPVIIGVDPAYSGVDDAVIYLRQGLHSKVLWTGNKTTDDLIMAKRIADFEDQYQADAVF CCCEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCHHHCCCCCEEE IDFGYGTGLKSIGDGWGRTWQLVPFGGASTDPQMLNKRGEMFNSCKTWLRLGGMLDDQET EECCCCCCHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHH ADDLSAAEYKVRVDGKIVIEPKEDIKERLGRSPGKGDALLLTFAFPVSKRINIPGQQSQQ HHHHCCCEEEEEECCEEEECCHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCC GRAITDYDPYA CCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA