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The map label for this gene is yfcR

Identifier: 218700814

GI number: 218700814

Start: 2573219

End: 2573788

Strand: Reverse

Name: yfcR

Synonym: ECIAI39_2488

Alternate gene names: 218700814

Gene position: 2573788-2573219 (Counterclockwise)

Preceding gene: 218700815

Following gene: 218700813

Centisome position: 50.15

GC content: 57.54

Gene sequence:

>570_bases
GTGAAGGGGACACCTGCAAGGTGGATGAAGATCAAAGCAGCAAAGGCTGATAACGGGAGAAGCAACATGAAAGCGTTCTT
TCTGGCCGGGTCTGCCGCGCTACTGCTGGCCTGTGGCTCGACCGTTTCCCCGGCAATGGCGGGCGGCAAAATCGTCAACC
TGACGCTGCGCGTACTGGTGGATGGGCCACCGCCCTGCTCGATACAGGGAAGCGCGGTGGAGTTCGGCAGTGTGGTCATT
AAAGGCATTAATGGCACCAACTACCGTCAGCCGGTGGGCTACACCATGAACTGTTCAAACAGCGTCAGCGACGACCTGCG
AATGCAGCTTCAGGCCACCACCACCACAATTAATGGTGAAACGGTGCTGAGTACCGGGATCGATGGCTTTGGCATTCGCA
TTCAGAATGCCACCGACCATTCGCTGGTGGCCGTGGGCAACAGTAGCTGGCTGCCGTTCAACATCAACACCCGGCCAGAC
TTCGAAGCCGTCCCGGTGAAGCAGAGCGGGGTGGAACTGATGGCATCGGAGTTTAACGCGACCATGACTATGGTGGTGGA
CTACCAATGA

Upstream 100 bases:

>100_bases
TCGCCGAAAACGTCACAGCCGTTAAAGGCAAAAATGGACAGCGCCCCGGTGCTGACCTACATCAACGACTACGGCGCGCG
CCTGCCGCTGATCTTCCGCT

Downstream 100 bases:

>100_bases
AACGACTCGCGTGGTGCTTACTTTACGGTTTTGCTGGCCTGGCGCAGGCCGCGGTTAACGACGTTACTTTTCACGGCACG
CTGGTCTCGCCGCCCGCCTG

Product: putative fimbrial-like adhesin exported protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKGTPARWMKIKAAKADNGRSNMKAFFLAGSAALLLACGSTVSPAMAGGKIVNLTLRVLVDGPPPCSIQGSAVEFGSVVI
KGINGTNYRQPVGYTMNCSNSVSDDLRMQLQATTTTINGETVLSTGIDGFGIRIQNATDHSLVAVGNSSWLPFNINTRPD
FEAVPVKQSGVELMASEFNATMTMVVDYQ

Sequences:

>Translated_189_residues
MKGTPARWMKIKAAKADNGRSNMKAFFLAGSAALLLACGSTVSPAMAGGKIVNLTLRVLVDGPPPCSIQGSAVEFGSVVI
KGINGTNYRQPVGYTMNCSNSVSDDLRMQLQATTTTINGETVLSTGIDGFGIRIQNATDHSLVAVGNSSWLPFNINTRPD
FEAVPVKQSGVELMASEFNATMTMVVDYQ
>Mature_189_residues
MKGTPARWMKIKAAKADNGRSNMKAFFLAGSAALLLACGSTVSPAMAGGKIVNLTLRVLVDGPPPCSIQGSAVEFGSVVI
KGINGTNYRQPVGYTMNCSNSVSDDLRMQLQATTTTINGETVLSTGIDGFGIRIQNATDHSLVAVGNSSWLPFNINTRPD
FEAVPVKQSGVELMASEFNATMTMVVDYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788676, Length=167, Percent_Identity=60.4790419161677, Blast_Score=211, Evalue=3e-56,
Organism=Escherichia coli, GI1788675, Length=166, Percent_Identity=34.9397590361446, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19981; Mature: 19981

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTPARWMKIKAAKADNGRSNMKAFFLAGSAALLLACGSTVSPAMAGGKIVNLTLRVLV
CCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCCCCHHHCCCEEEEEEEEEEE
DGPPPCSIQGSAVEFGSVVIKGINGTNYRQPVGYTMNCSNSVSDDLRMQLQATTTTINGE
CCCCCCCEECCEEEECEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEECCC
TVLSTGIDGFGIRIQNATDHSLVAVGNSSWLPFNINTRPDFEAVPVKQSGVELMASEFNA
EEEECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCCCEEECCCCCCHHEEECCCCC
TMTMVVDYQ
EEEEEEEEC
>Mature Secondary Structure
MKGTPARWMKIKAAKADNGRSNMKAFFLAGSAALLLACGSTVSPAMAGGKIVNLTLRVLV
CCCCCCCEEEEEEECCCCCCCCEEEEEEECCEEEEEEECCCCCHHHCCCEEEEEEEEEEE
DGPPPCSIQGSAVEFGSVVIKGINGTNYRQPVGYTMNCSNSVSDDLRMQLQATTTTINGE
CCCCCCCEECCEEEECEEEEECCCCCCCCCCCCEEEECCCCCCCCEEEEEEEEEEEECCC
TVLSTGIDGFGIRIQNATDHSLVAVGNSSWLPFNINTRPDFEAVPVKQSGVELMASEFNA
EEEECCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCCCEEECCCCCCHHEEECCCCC
TMTMVVDYQ
EEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]