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The map label for this gene is yfcO

Identifier: 218700811

GI number: 218700811

Start: 2571369

End: 2572229

Strand: Reverse

Name: yfcO

Synonym: ECIAI39_2485

Alternate gene names: 218700811

Gene position: 2572229-2571369 (Counterclockwise)

Preceding gene: 218700812

Following gene: 218700806

Centisome position: 50.12

GC content: 50.17

Gene sequence:

>861_bases
TTGAGTACCTTTGATATGAAAATATTCCGTTTGATAACCTGTTTGTTACTGCTGATGTTTGCGGGGGAGGGCGCGCAGGC
GGCGAAAAAGATTGCCACGTTGCATACGATTTCGGGCATTTCCAGTTACAATACGCAAATCAGATACCACCTTGATATTC
TTACCCCCGACGGTGTTATGCATGGTGTGTATAAGAACTCCACCACCACGTTGCAAGTGGGTTATCTGGAAAATATTAGC
TGGACAGGGAGTGATACCCCGCCCAGTTTATATTCGAATTATTTTGTTTCAACATCGATGTCAAACTGCCCTGGGCTTGC
TGAGTATGATCAAAAATCGGATAAAACCAAGTGGGATTGTTACGATATGCCTATCGACGTTTATTATGATGCCGACGTGC
ATGGCTGCCCATGGCTGGTCACAACGTATAATGAGAGTTCTGCGCCGTTAGAAAAAACTATGGGCCCCTATATCGGCCCG
CAGGCGCGTAACTCGAGCTGCCCGGTCTCAGTAGCCACCTATGATATTTCGTGGAGTGAGGATTACATTTCGTATACGAA
GGTGCTGTCGTTGCAGTCGACGGGCGGCATAATTGAGAAAACGCTCCCGACCTTCCTGATGGAAAACGGCAAGCTTTGCG
ACGGCAGCCAGATGGATGAACGCGGTGCGTACTGCCGCTTTGTGGCAGAGATGATCACGTTCTCCACCTCCGGCTGCGAC
AATTCAAGCGTTACGGTTACGCCCAACCGGCACCCCATTACGGACAAACAACTGCACGACATGGTGGTGCAGGTGGATAC
CAGCAGCAGGCAGCCGATTGATTCCACCTGCCGCTTCCAGTACACGCTCAACGAGCTGTAG

Upstream 100 bases:

>100_bases
AGTAACGGTGATAACAATCTGAATTTTAATGCCTGGCTCCAGGCGAAAAGTGGCCGGGAAGTGACGATGGGTGAGTTTAC
CGCATCCTTAACCGCAACGT

Downstream 100 bases:

>100_bases
CGTATACACCACACGACGCGGGGCCATCTGGCCCCGTTGTCCGTTATGTCATGCGGTCATCCAGTTTTTTAGAATATTCG
CCACCACGGGAGCGAAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MSTFDMKIFRLITCLLLLMFAGEGAQAAKKIATLHTISGISSYNTQIRYHLDILTPDGVMHGVYKNSTTTLQVGYLENIS
WTGSDTPPSLYSNYFVSTSMSNCPGLAEYDQKSDKTKWDCYDMPIDVYYDADVHGCPWLVTTYNESSAPLEKTMGPYIGP
QARNSSCPVSVATYDISWSEDYISYTKVLSLQSTGGIIEKTLPTFLMENGKLCDGSQMDERGAYCRFVAEMITFSTSGCD
NSSVTVTPNRHPITDKQLHDMVVQVDTSSRQPIDSTCRFQYTLNEL

Sequences:

>Translated_286_residues
MSTFDMKIFRLITCLLLLMFAGEGAQAAKKIATLHTISGISSYNTQIRYHLDILTPDGVMHGVYKNSTTTLQVGYLENIS
WTGSDTPPSLYSNYFVSTSMSNCPGLAEYDQKSDKTKWDCYDMPIDVYYDADVHGCPWLVTTYNESSAPLEKTMGPYIGP
QARNSSCPVSVATYDISWSEDYISYTKVLSLQSTGGIIEKTLPTFLMENGKLCDGSQMDERGAYCRFVAEMITFSTSGCD
NSSVTVTPNRHPITDKQLHDMVVQVDTSSRQPIDSTCRFQYTLNEL
>Mature_285_residues
STFDMKIFRLITCLLLLMFAGEGAQAAKKIATLHTISGISSYNTQIRYHLDILTPDGVMHGVYKNSTTTLQVGYLENISW
TGSDTPPSLYSNYFVSTSMSNCPGLAEYDQKSDKTKWDCYDMPIDVYYDADVHGCPWLVTTYNESSAPLEKTMGPYIGPQ
ARNSSCPVSVATYDISWSEDYISYTKVLSLQSTGGIIEKTLPTFLMENGKLCDGSQMDERGAYCRFVAEMITFSTSGCDN
SSVTVTPNRHPITDKQLHDMVVQVDTSSRQPIDSTCRFQYTLNEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium yadU [H]

Homologues:

Organism=Escherichia coli, GI87082086, Length=290, Percent_Identity=46.2068965517241, Blast_Score=249, Evalue=1e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021407 [H]

Pfam domain/function: PF11245 DUF2544 [H]

EC number: NA

Molecular weight: Translated: 31896; Mature: 31765

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFDMKIFRLITCLLLLMFAGEGAQAAKKIATLHTISGISSYNTQIRYHLDILTPDGVM
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCE
HGVYKNSTTTLQVGYLENISWTGSDTPPSLYSNYFVSTSMSNCPGLAEYDQKSDKTKWDC
EEEECCCCCEEEEEEEECCEECCCCCCHHHHHCEEEECCCCCCCCCCHHCCCCCCCCCEE
YDMPIDVYYDADVHGCPWLVTTYNESSAPLEKTMGPYIGPQARNSSCPVSVATYDISWSE
ECCCEEEEECCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEECCCH
DYISYTKVLSLQSTGGIIEKTLPTFLMENGKLCDGSQMDERGAYCRFVAEMITFSTSGCD
HHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
NSSVTVTPNRHPITDKQLHDMVVQVDTSSRQPIDSTCRFQYTLNEL
CCEEEECCCCCCCCHHHHEEEEEEEECCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
STFDMKIFRLITCLLLLMFAGEGAQAAKKIATLHTISGISSYNTQIRYHLDILTPDGVM
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCE
HGVYKNSTTTLQVGYLENISWTGSDTPPSLYSNYFVSTSMSNCPGLAEYDQKSDKTKWDC
EEEECCCCCEEEEEEEECCEECCCCCCHHHHHCEEEECCCCCCCCCCHHCCCCCCCCCEE
YDMPIDVYYDADVHGCPWLVTTYNESSAPLEKTMGPYIGPQARNSSCPVSVATYDISWSE
ECCCEEEEECCCCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEEECCCH
DYISYTKVLSLQSTGGIIEKTLPTFLMENGKLCDGSQMDERGAYCRFVAEMITFSTSGCD
HHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
NSSVTVTPNRHPITDKQLHDMVVQVDTSSRQPIDSTCRFQYTLNEL
CCEEEECCCCCCCCHHHHEEEEEEEECCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]