Click here to switch to the map view.

The map label for this gene is torT

Identifier: 218700494

GI number: 218700494

Start: 2206266

End: 2207294

Strand: Reverse

Name: torT

Synonym: ECIAI39_2160

Alternate gene names: 218700494

Gene position: 2207294-2206266 (Counterclockwise)

Preceding gene: 218700497

Following gene: 218700492

Centisome position: 43.01

GC content: 53.55

Gene sequence:

>1029_bases
ATGCGCGTACTGCTATTGTTACTTCTTTCCCTTTTCATGTTATCGGCATTTTCGGCTGATCACCTGTTGCGCTGGCATGA
TGCGCAGCATTACACGGTGCAAGCCTCTACGCCGCTTAACGCCAAACGCGCATGGAAACTGTGCGCGCTTTATCCCAGCC
TGAAAGATTCATACTGGTTATCGTTGAACTATGGTATGCAGGAGGCTGCTCGCCGCTACGGTGTGGATTTAAAAGTGCTG
GAGGCAGGTGGCTACAGCCAGTTGGCTACCCAGCAAGCACAAATCGACCAGTGTAAACAGTGGGGCGCAGAGGCCATCTT
GCTCGGAAGTAGCACGACGTCATTTCCCGACCTGCAAAAGCAGGTAGCAAATCTGCCGGTGATCGAACTGGTGAATGCTA
TTGATGCTCCCCACGTGAAAAGCCGCGTTGGTGTGCCCTGGTTTCAGATGGGCTATCAACCAGGACGATATCTGGTGCAA
TGGAGCCACGGTAAACCACTGAACGTGCTGTTGATGCCCGGACCCGATAATGCCGGGGGCAGTAAGGAGATGGTAGAGGG
TTTTCGCGCAGCCATTGCCGGAAGCCCGGTACGTATTGTTGATATTGCGCTCGGTGATAACGATATTGAAATCCAGCGTA
ACCTGTTGCAGGAGATGCTGGAGCGCCATCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATG
GGGGAAGGGCGTAACCTGAAAACACCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCG
GGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTGGCAGGGGGAACTGGCGGTTGAGCAGGCCATCAGGCAATTAC
AGGGGCAATCGGTGTCTGATAATGTCAGCCCACCGATTTTAGTTCTGACGCCGAAAAATGCCGACCGTGAACATATCCGC
CGCTCGCTGTCGCCAGGGGGATTTCGTCCGGTCTATTTTTATCAGCACACATCAGCGGCTAAGAAATAA

Upstream 100 bases:

>100_bases
GGTCAGGGTTAAATTCACGGTCGGTGCACTTAAGGTGAAAAAGGTTGAGTCGCAAAGCGGAATGCATCTAGCATAAAGCC
TTATTATTGATGAGGCTATC

Downstream 100 bases:

>100_bases
CCTTCGCCATGTTGCGTCACCAGTAAATCCGCGCTGAGTTTATGGCGTAAACGACGAATTAACACATCGACGGTGCGCAG
GTCAGGATTTTCCACCCGAC

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRVLLLLLLSLFMLSAFSADHLLRWHDAQHYTVQASTPLNAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVL
EAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNAIDAPHVKSRVGVPWFQMGYQPGRYLVQ
WSHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIR
RSLSPGGFRPVYFYQHTSAAKK

Sequences:

>Translated_342_residues
MRVLLLLLLSLFMLSAFSADHLLRWHDAQHYTVQASTPLNAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVL
EAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNAIDAPHVKSRVGVPWFQMGYQPGRYLVQ
WSHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIR
RSLSPGGFRPVYFYQHTSAAKK
>Mature_342_residues
MRVLLLLLLSLFMLSAFSADHLLRWHDAQHYTVQASTPLNAKRAWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVL
EAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNAIDAPHVKSRVGVPWFQMGYQPGRYLVQ
WSHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIR
RSLSPGGFRPVYFYQHTSAAKK

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=342, Percent_Identity=97.6608187134503, Blast_Score=645, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37898; Mature: 37898

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLLLLLSLFMLSAFSADHLLRWHDAQHYTVQASTPLNAKRAWKLCALYPSLKDSYWL
CHHHHHHHHHHHHHHHCCHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEE
SLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQK
EEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
QVANLPVIELVNAIDAPHVKSRVGVPWFQMGYQPGRYLVQWSHGKPLNVLLMPGPDNAGG
HHHCCCHHHHHHHCCCCCHHHHCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCC
SKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
CHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEECHHHHHHHHHHHHCCCCCCC
NVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK
CCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MRVLLLLLLSLFMLSAFSADHLLRWHDAQHYTVQASTPLNAKRAWKLCALYPSLKDSYWL
CHHHHHHHHHHHHHHHCCHHHHHEECCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCEEE
SLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQK
EEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
QVANLPVIELVNAIDAPHVKSRVGVPWFQMGYQPGRYLVQWSHGKPLNVLLMPGPDNAGG
HHHCCCHHHHHHHCCCCCHHHHCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCC
SKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
CHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEECHHHHHHHHHHHHCCCCCCC
NVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK
CCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]