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The map label for this gene is ymfO [C]

Identifier: 218700355

GI number: 218700355

Start: 2064347

End: 2065561

Strand: Reverse

Name: ymfO [C]

Synonym: ECIAI39_2015

Alternate gene names: 218700355

Gene position: 2065561-2064347 (Counterclockwise)

Preceding gene: 218700356

Following gene: 218700354

Centisome position: 40.25

GC content: 56.38

Gene sequence:

>1215_bases
ATGTGGCCTTTCAGACGAAAACAAGAGCATCGCAGCATGACGCTGGATGAATTTATGGCGCTGGCTGGCACATCGAACAC
GGGGGCGGGTGAGTACGTATCATCGGGGACAGCGGAATCACTCCCCGCCGTCATGAACGCCGTCACGGTCATCTCTGAGG
CGGTGGCTACTATGCCATGCTACCTGTACCTGGTACGCAATGAGAAGGGGAAGGAGGCCCGCGAGTGGCTTGATTCTCAT
CCGGTCGATCATATCCTCAACGAGCGCCCGAACGCGTGGCAGACGCCCTATCAGTTTAAGCGAATGATGGTCCGCCACTG
CCTGTTAAACGGTAATGCTTATGCGGTGATTCAGTGGGGGCGTGATGGTTTTCCAGTGGCTTTGCACCCTTACCCGCCGC
AGTCGGTGAATGTTGAGCAGACAGGGGAACATAACTGGCGTTACCGCATCACTGACGCTTACAGCGGAAACACCCGCAAC
TATTTACCGTGGGAGGTTCTCCACCTTCGTTACTCCACGGATGACGGCTTTATGGGGCGCTCACCTGTGACCATCTGCCG
CGAATCGCTGGGGCTTGGGCTGGCCCAACAGCGCCACGGCGCGAGCGTGATGCGTGATGGCATGATGGCAGCAGGGGTTA
TCACGTCAGGCGAATGGCTGGACGGCGTGAAGGGCAAACAGGCATTAGCCGCACTGGAACGCTACAAAGGAGCCAGAAAC
GCCGGAAAAACGCCCATTCTTGAAGGGGGTATGAGCTATCAGCAGCTTGGCATGAGTAACCAGGATGCTGAATGGCTGGC
CTCCCGTCGCTTCACCATTGAAGACATCGCCCGAATGTTCAACGTCTCGCCGATTTTTCTGCAGGAATACAGCAACAGCA
CCTACAGCAATTTCAGCGAGGCAAGCCGCGCATTTCTCACCATGACGATGCGCCCGTGGCTGGCGAACTTTGAGCAGCAG
ATAAAAAATGCTTTGCTGGTGGCCTCGCCTGTACCTGGTATCCGGTATCAGGTGGAGTTTGACAGCGCGGATCTGTTACG
GGCCACACCTGGCGAACGCTTTGCCACCTATGAACGCGGCATCAAGTCCGGCGTTATGTGCCCGAACGAAGCCCGCGAAC
GTGAGGGATTATCGCCGCGTGATGGTGGCGATGAGTTCAGCCAGGCCTGGAAACAGGAGATCGAAGTAAAGGATGATAAA
GAGGGCAAATCATGA

Upstream 100 bases:

>100_bases
GGCGTGGATCTGGCCCGCCGTTCCCTGTATGAGCAGCACCCCGAAAAAATGCCACGCGCGGATAATCGCCGCTGGTGGGC
GGATTTAGCGGGGGTGTGAT

Downstream 100 bases:

>100_bases
GAGCGGGGAGCATGAGGGATCGCATTGTCATCATGAGCGCGAAACTTTCCCGCCTCCCTTCCGGTGCAATGAAAAGCACA
TGGGAGGATGTTGCCACCGT

Product: putative head portal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MWPFRRKQEHRSMTLDEFMALAGTSNTGAGEYVSSGTAESLPAVMNAVTVISEAVATMPCYLYLVRNEKGKEAREWLDSH
PVDHILNERPNAWQTPYQFKRMMVRHCLLNGNAYAVIQWGRDGFPVALHPYPPQSVNVEQTGEHNWRYRITDAYSGNTRN
YLPWEVLHLRYSTDDGFMGRSPVTICRESLGLGLAQQRHGASVMRDGMMAAGVITSGEWLDGVKGKQALAALERYKGARN
AGKTPILEGGMSYQQLGMSNQDAEWLASRRFTIEDIARMFNVSPIFLQEYSNSTYSNFSEASRAFLTMTMRPWLANFEQQ
IKNALLVASPVPGIRYQVEFDSADLLRATPGERFATYERGIKSGVMCPNEAREREGLSPRDGGDEFSQAWKQEIEVKDDK
EGKS

Sequences:

>Translated_404_residues
MWPFRRKQEHRSMTLDEFMALAGTSNTGAGEYVSSGTAESLPAVMNAVTVISEAVATMPCYLYLVRNEKGKEAREWLDSH
PVDHILNERPNAWQTPYQFKRMMVRHCLLNGNAYAVIQWGRDGFPVALHPYPPQSVNVEQTGEHNWRYRITDAYSGNTRN
YLPWEVLHLRYSTDDGFMGRSPVTICRESLGLGLAQQRHGASVMRDGMMAAGVITSGEWLDGVKGKQALAALERYKGARN
AGKTPILEGGMSYQQLGMSNQDAEWLASRRFTIEDIARMFNVSPIFLQEYSNSTYSNFSEASRAFLTMTMRPWLANFEQQ
IKNALLVASPVPGIRYQVEFDSADLLRATPGERFATYERGIKSGVMCPNEAREREGLSPRDGGDEFSQAWKQEIEVKDDK
EGKS
>Mature_404_residues
MWPFRRKQEHRSMTLDEFMALAGTSNTGAGEYVSSGTAESLPAVMNAVTVISEAVATMPCYLYLVRNEKGKEAREWLDSH
PVDHILNERPNAWQTPYQFKRMMVRHCLLNGNAYAVIQWGRDGFPVALHPYPPQSVNVEQTGEHNWRYRITDAYSGNTRN
YLPWEVLHLRYSTDDGFMGRSPVTICRESLGLGLAQQRHGASVMRDGMMAAGVITSGEWLDGVKGKQALAALERYKGARN
AGKTPILEGGMSYQQLGMSNQDAEWLASRRFTIEDIARMFNVSPIFLQEYSNSTYSNFSEASRAFLTMTMRPWLANFEQQ
IKNALLVASPVPGIRYQVEFDSADLLRATPGERFATYERGIKSGVMCPNEAREREGLSPRDGGDEFSQAWKQEIEVKDDK
EGKS

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage portal family. HK97 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006944
- InterPro:   IPR006427 [H]

Pfam domain/function: PF04860 Phage_portal [H]

EC number: NA

Molecular weight: Translated: 45552; Mature: 45552

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWPFRRKQEHRSMTLDEFMALAGTSNTGAGEYVSSGTAESLPAVMNAVTVISEAVATMPC
CCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCE
YLYLVRNEKGKEAREWLDSHPVDHILNERPNAWQTPYQFKRMMVRHCLLNGNAYAVIQWG
EEEEEECCCCHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEC
RDGFPVALHPYPPQSVNVEQTGEHNWRYRITDAYSGNTRNYLPWEVLHLRYSTDDGFMGR
CCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCC
SPVTICRESLGLGLAQQRHGASVMRDGMMAAGVITSGEWLDGVKGKQALAALERYKGARN
CHHHHHHHHHCCCHHHHHCCHHHHHCCCHHHEEEECCCHHCCCCHHHHHHHHHHHHCCCC
AGKTPILEGGMSYQQLGMSNQDAEWLASRRFTIEDIARMFNVSPIFLQEYSNSTYSNFSE
CCCCCEECCCCCHHHHCCCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHH
ASRAFLTMTMRPWLANFEQQIKNALLVASPVPGIRYQVEFDSADLLRATPGERFATYERG
HHHHHHEEEHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCHHHCCCCCHHHHHHHHH
IKSGVMCPNEAREREGLSPRDGGDEFSQAWKQEIEVKDDKEGKS
HHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MWPFRRKQEHRSMTLDEFMALAGTSNTGAGEYVSSGTAESLPAVMNAVTVISEAVATMPC
CCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCE
YLYLVRNEKGKEAREWLDSHPVDHILNERPNAWQTPYQFKRMMVRHCLLNGNAYAVIQWG
EEEEEECCCCHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEC
RDGFPVALHPYPPQSVNVEQTGEHNWRYRITDAYSGNTRNYLPWEVLHLRYSTDDGFMGR
CCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCCCCCC
SPVTICRESLGLGLAQQRHGASVMRDGMMAAGVITSGEWLDGVKGKQALAALERYKGARN
CHHHHHHHHHCCCHHHHHCCHHHHHCCCHHHEEEECCCHHCCCCHHHHHHHHHHHHCCCC
AGKTPILEGGMSYQQLGMSNQDAEWLASRRFTIEDIARMFNVSPIFLQEYSNSTYSNFSE
CCCCCEECCCCCHHHHCCCCCCHHHHHHCCCCHHHHHHHHCCCHHHHHHHCCCCHHHHHH
ASRAFLTMTMRPWLANFEQQIKNALLVASPVPGIRYQVEFDSADLLRATPGERFATYERG
HHHHHHEEEHHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCCHHHCCCCCHHHHHHHHH
IKSGVMCPNEAREREGLSPRDGGDEFSQAWKQEIEVKDDKEGKS
HHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA