| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is 218700282
Identifier: 218700282
GI number: 218700282
Start: 2007191
End: 2008960
Strand: Reverse
Name: 218700282
Synonym: ECIAI39_1937
Alternate gene names: NA
Gene position: 2008960-2007191 (Counterclockwise)
Preceding gene: 218700283
Following gene: 218700281
Centisome position: 39.15
GC content: 58.42
Gene sequence:
>1770_bases ATGAATGCTGCCCTGACTGAACGACTGGTTTATGTCGCCCGCGCGGCACGTGACGCGGGGCATGGTAAACGCGGTGCAAT ATACGACGCTGCCTGTGCTGAACTTGGCATGTCCCGCGCCACTCTGCTGCGCAGGCTGAAGGAGGTCTCTGTGACTGATA AACGCAAAAAACGCGCTGATGCCGGACGCAGCGCCCTGACCCGCGACGAAGCCGCGCTGATATCTGCCACACTGCGTGAG GCCACCCGCAAGAACGGTAAACGCCTCTATTCCATCGCAGATGCAGTGGAAACCCTGCGGGCTAACGGCTTTATCACCGC AGGCAGAACAGATGAAACCACCGGTGAGTTTTTCCCGTTGTCTGAAGATGCCATCAGCCGTGCTCTGCGTAACTATGGCC TGCACCCGGAACAACTGGATGCTCCTGCACCGCATACCGAAGTGGCCAGTCTGCACCCCAATCATGTCTGGCAGATTGAC GCCTCACTCTGCACGCTTTACTACCTGAGCAATGGACATAAAGGGCTGCAGGTGATGGACAGCGCGAAGTTCTACAAGAA CAAGCCCGCTAACCTTGCCCGTATCGCCAGTGACCGCGTGTGGAGTTACGAGATTACCGACCATGCCAGCGGCTGGATTT ACGTTGAGTATGTGACGGGCGCGGAATCAGGTGAGAACCTGTGTTCTGTGCTTATCAACGCCATGCAGGAGCGTGGCGGC GCAGACGTGCTGCACGGCGTGCCAAAAATACTCTATCTCGACCCCGGCTCGGCAAACACCGCGGGTATGACGAAAAACAT GTGCCGCTCACTGGGCATCGACCTGATAGCGCACAAGCCGCATAACGCCCGCGCCACCGGACAGGTGGAAAAGGCGCGGG ACATTATCGAACGCAAGCTGGAGCCGGGTCTGAAGTTCCGGCCGGTTCACAGTCTGGAAGAACTCAATGCGCTGGCCGCG AAATGGCGCAGCCACTTTAACGCCACGGCTGTTCACAGCCGCCACGGTAAAACCCGCACGGATATCTGGCTGAAGATTAC TGCTGAGCAGCTGAAAAAAGCGCCTTCCGTTGAGGTATGTCGTGAACTGGCTGTGGCGGCACCAGAACTCCGCAAAGTCA CGCCAAAACTTCGTGTCTCGTTCCGGGGCACTGAATTTGACGTATCAACGGTACCGGGCGTACTGGTCGGTGAAAAACTG ATGATTACCCGTAACCCGTGGCGCAGCGATGTGGCACAGGTGGTTCTGACCGGTGAGGACGGCCACGAGACGTTCTTCCT GGTCGAAGAAGTCAGAAAGAACGAGTTTGGCTTTGCTGAAGGCGCGGCGGTATTTGGCGAAAGTTACAAAGCCCTGCCGG AAACCCCGGCGCAGATGGCGGCAAAAGAAACCGAAGCGCTGGTCACCGGTACAGACAACGCCGCAGATGCAGCTGCCGCA CGCAAGGCGAAGGCGCTGCCGTTCGGCGGGCGGCTTGACCCGTATAAACATATTGATGACGCCACACTTCCGGCCTATAT GCCGAAGCGAGGTCAGGCCTCTGACGTACGCGGGTCGCGCACTGAACAACGTCCCATGACTCATGTGGAGGCCGCGAAAG CCCTGCGCGATAAGTTCAGCGCCGACGGCCTTACCTGGACGCCGGAACATTACCGCCAGTTAACGGCACAGTATCCGGAC GGCGTACCGGAAGCCGCACTGGATGAAGTCATGGCCACGCTGACCACGCCGGCCCGCAGCAGCGTTATCAGCATTGTTAA CGGCAACTGA
Upstream 100 bases:
>100_bases GCGCTCCACATTTGACCTGCCGGATGAGCCAACAGGCAATGCCGCGCCTTCATGGCTGACTGAGCCGACGCCACAGATTA ACGGGCTGGAGGCATAACCA
Downstream 100 bases:
>100_bases GGAGGGATACATGCTGGTACTGAAGCAGCAACTGAAAGAGGCCCGTATTCCACAGGCGGTGGTGGCGAGAGCTGTCGATG TTTCTGAGGCCACGCTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Site-Specific Recombinase Phage Integrase Family; Integrase Rve Superfamily Protein; Transposase; Phage Integrase; Phage-Like Protein; Integrase; Integrase Protein; Integrase Catalytic Subunit
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MNAALTERLVYVARAARDAGHGKRGAIYDAACAELGMSRATLLRRLKEVSVTDKRKKRADAGRSALTRDEAALISATLRE ATRKNGKRLYSIADAVETLRANGFITAGRTDETTGEFFPLSEDAISRALRNYGLHPEQLDAPAPHTEVASLHPNHVWQID ASLCTLYYLSNGHKGLQVMDSAKFYKNKPANLARIASDRVWSYEITDHASGWIYVEYVTGAESGENLCSVLINAMQERGG ADVLHGVPKILYLDPGSANTAGMTKNMCRSLGIDLIAHKPHNARATGQVEKARDIIERKLEPGLKFRPVHSLEELNALAA KWRSHFNATAVHSRHGKTRTDIWLKITAEQLKKAPSVEVCRELAVAAPELRKVTPKLRVSFRGTEFDVSTVPGVLVGEKL MITRNPWRSDVAQVVLTGEDGHETFFLVEEVRKNEFGFAEGAAVFGESYKALPETPAQMAAKETEALVTGTDNAADAAAA RKAKALPFGGRLDPYKHIDDATLPAYMPKRGQASDVRGSRTEQRPMTHVEAAKALRDKFSADGLTWTPEHYRQLTAQYPD GVPEAALDEVMATLTTPARSSVISIVNGN
Sequences:
>Translated_589_residues MNAALTERLVYVARAARDAGHGKRGAIYDAACAELGMSRATLLRRLKEVSVTDKRKKRADAGRSALTRDEAALISATLRE ATRKNGKRLYSIADAVETLRANGFITAGRTDETTGEFFPLSEDAISRALRNYGLHPEQLDAPAPHTEVASLHPNHVWQID ASLCTLYYLSNGHKGLQVMDSAKFYKNKPANLARIASDRVWSYEITDHASGWIYVEYVTGAESGENLCSVLINAMQERGG ADVLHGVPKILYLDPGSANTAGMTKNMCRSLGIDLIAHKPHNARATGQVEKARDIIERKLEPGLKFRPVHSLEELNALAA KWRSHFNATAVHSRHGKTRTDIWLKITAEQLKKAPSVEVCRELAVAAPELRKVTPKLRVSFRGTEFDVSTVPGVLVGEKL MITRNPWRSDVAQVVLTGEDGHETFFLVEEVRKNEFGFAEGAAVFGESYKALPETPAQMAAKETEALVTGTDNAADAAAA RKAKALPFGGRLDPYKHIDDATLPAYMPKRGQASDVRGSRTEQRPMTHVEAAKALRDKFSADGLTWTPEHYRQLTAQYPD GVPEAALDEVMATLTTPARSSVISIVNGN >Mature_589_residues MNAALTERLVYVARAARDAGHGKRGAIYDAACAELGMSRATLLRRLKEVSVTDKRKKRADAGRSALTRDEAALISATLRE ATRKNGKRLYSIADAVETLRANGFITAGRTDETTGEFFPLSEDAISRALRNYGLHPEQLDAPAPHTEVASLHPNHVWQID ASLCTLYYLSNGHKGLQVMDSAKFYKNKPANLARIASDRVWSYEITDHASGWIYVEYVTGAESGENLCSVLINAMQERGG ADVLHGVPKILYLDPGSANTAGMTKNMCRSLGIDLIAHKPHNARATGQVEKARDIIERKLEPGLKFRPVHSLEELNALAA KWRSHFNATAVHSRHGKTRTDIWLKITAEQLKKAPSVEVCRELAVAAPELRKVTPKLRVSFRGTEFDVSTVPGVLVGEKL MITRNPWRSDVAQVVLTGEDGHETFFLVEEVRKNEFGFAEGAAVFGESYKALPETPAQMAAKETEALVTGTDNAADAAAA RKAKALPFGGRLDPYKHIDDATLPAYMPKRGQASDVRGSRTEQRPMTHVEAAKALRDKFSADGLTWTPEHYRQLTAQYPD GVPEAALDEVMATLTTPARSSVISIVNGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64485; Mature: 64485
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAALTERLVYVARAARDAGHGKRGAIYDAACAELGMSRATLLRRLKEVSVTDKRKKRAD CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH AGRSALTRDEAALISATLREATRKNGKRLYSIADAVETLRANGFITAGRTDETTGEFFPL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC SEDAISRALRNYGLHPEQLDAPAPHTEVASLHPNHVWQIDASLCTLYYLSNGHKGLQVMD CHHHHHHHHHHCCCCHHHCCCCCCCCCHHCCCCCCEEEEHHHHEEEEHHHCCCCCCHHHH SAKFYKNKPANLARIASDRVWSYEITDHASGWIYVEYVTGAESGENLCSVLINAMQERGG HHHHHCCCCCHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCC ADVLHGVPKILYLDPGSANTAGMTKNMCRSLGIDLIAHKPHNARATGQVEKARDIIERKL CHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHH EPGLKFRPVHSLEELNALAAKWRSHFNATAVHSRHGKTRTDIWLKITAEQLKKAPSVEVC CCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEHHCCCCCCCEEEEEEEHHHHCCCCCHHHH RELAVAAPELRKVTPKLRVSFRGTEFDVSTVPGVLVGEKLMITRNPWRSDVAQVVLTGED HHHHHCCHHHHHCCCHHEEEECCCEEEHHHCCCHHCCCEEEEECCCCHHCCEEEEEECCC GHETFFLVEEVRKNEFGFAEGAAVFGESYKALPETPAQMAAKETEALVTGTDNAADAAAA CCCEEEEHHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCEEEECCCCHHHHHHH RKAKALPFGGRLDPYKHIDDATLPAYMPKRGQASDVRGSRTEQRPMTHVEAAKALRDKFS HHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC ADGLTWTPEHYRQLTAQYPDGVPEAALDEVMATLTTPARSSVISIVNGN CCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCC >Mature Secondary Structure MNAALTERLVYVARAARDAGHGKRGAIYDAACAELGMSRATLLRRLKEVSVTDKRKKRAD CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH AGRSALTRDEAALISATLREATRKNGKRLYSIADAVETLRANGFITAGRTDETTGEFFPL HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCC SEDAISRALRNYGLHPEQLDAPAPHTEVASLHPNHVWQIDASLCTLYYLSNGHKGLQVMD CHHHHHHHHHHCCCCHHHCCCCCCCCCHHCCCCCCEEEEHHHHEEEEHHHCCCCCCHHHH SAKFYKNKPANLARIASDRVWSYEITDHASGWIYVEYVTGAESGENLCSVLINAMQERGG HHHHHCCCCCHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCC ADVLHGVPKILYLDPGSANTAGMTKNMCRSLGIDLIAHKPHNARATGQVEKARDIIERKL CHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHH EPGLKFRPVHSLEELNALAAKWRSHFNATAVHSRHGKTRTDIWLKITAEQLKKAPSVEVC CCCCCCCCCHHHHHHHHHHHHHHHCCCHHEEHHCCCCCCCEEEEEEEHHHHCCCCCHHHH RELAVAAPELRKVTPKLRVSFRGTEFDVSTVPGVLVGEKLMITRNPWRSDVAQVVLTGED HHHHHCCHHHHHCCCHHEEEECCCEEEHHHCCCHHCCCEEEEECCCCHHCCEEEEEECCC GHETFFLVEEVRKNEFGFAEGAAVFGESYKALPETPAQMAAKETEALVTGTDNAADAAAA CCCEEEEHHHHHCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHCCEEEECCCCHHHHHHH RKAKALPFGGRLDPYKHIDDATLPAYMPKRGQASDVRGSRTEQRPMTHVEAAKALRDKFS HHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC ADGLTWTPEHYRQLTAQYPDGVPEAALDEVMATLTTPARSSVISIVNGN CCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA