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The map label for this gene is ycgI [H]

Identifier: 218700248

GI number: 218700248

Start: 1978801

End: 1979244

Strand: Reverse

Name: ycgI [H]

Synonym: ECIAI39_1900

Alternate gene names: 218700248

Gene position: 1979244-1978801 (Counterclockwise)

Preceding gene: 218700252

Following gene: 218700244

Centisome position: 38.57

GC content: 50.68

Gene sequence:

>444_bases
GTGAACACAATATACTTGCGCTGTCTCTTCAGGAGCAATCCCCTGGTCTGGTGCCTGCGGGCTGATGTTGCAGCAGAGCT
AAGGTCGCTTAGACGCTACTATCATTTATCCAATGGCATGGAATCGAAATTAGTCGATACCCGCAGTATATATCGTGAAC
TGGGCGCAACGCTGAGTTACAACATGCGTCTGGGGAACGGCATGAAAGTTGAGCCGTGGCTGAAGGTGGCTGTGCGCGAA
GAATTTGTCGATGATAATCGGGTGAAAGTGAATAATGACGGTAATTTTGTCAATAATTTGTCGGGCAGACGTGGAATATA
TCAGGCAGGTATTAAAGCCTCATTCAGCAGTTCGTTAAGCGGGCATCTCGGGGTGGGGTATAGCCATGGTGCCGGTGTGG
AATCCCCGTGGAACGCGGTGGCTGGTGCGAACTGGTCGTTCTGA

Upstream 100 bases:

>100_bases
AGTGATTTTTTATCCAACTACACTTCAGCGCACTGCGTTTAAAAAATGCCTCTTTCTTATGCGGGATATCATTATTTCAT
CATGATGTCTTTGGTGAGCG

Downstream 100 bases:

>100_bases
CCATCAACGATTAAACTGCGCTTCGGCGTAGTTTTCGTTTACAGGGTGTTAAAAGGGAAAATTCTGCGGCAAAAAAAGCC
CGCCAGTTACGGCGGGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MNTIYLRCLFRSNPLVWCLRADVAAELRSLRRYYHLSNGMESKLVDTRSIYRELGATLSYNMRLGNGMKVEPWLKVAVRE
EFVDDNRVKVNNDGNFVNNLSGRRGIYQAGIKASFSSSLSGHLGVGYSHGAGVESPWNAVAGANWSF

Sequences:

>Translated_147_residues
MNTIYLRCLFRSNPLVWCLRADVAAELRSLRRYYHLSNGMESKLVDTRSIYRELGATLSYNMRLGNGMKVEPWLKVAVRE
EFVDDNRVKVNNDGNFVNNLSGRRGIYQAGIKASFSSSLSGHLGVGYSHGAGVESPWNAVAGANWSF
>Mature_147_residues
MNTIYLRCLFRSNPLVWCLRADVAAELRSLRRYYHLSNGMESKLVDTRSIYRELGATLSYNMRLGNGMKVEPWLKVAVRE
EFVDDNRVKVNNDGNFVNNLSGRRGIYQAGIKASFSSSLSGHLGVGYSHGAGVESPWNAVAGANWSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082145, Length=114, Percent_Identity=91.2280701754386, Blast_Score=212, Evalue=8e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR003991 [H]

Pfam domain/function: PF03797 Autotransporter [H]

EC number: NA

Molecular weight: Translated: 16466; Mature: 16466

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTIYLRCLFRSNPLVWCLRADVAAELRSLRRYYHLSNGMESKLVDTRSIYRELGATLSY
CCEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEE
NMRLGNGMKVEPWLKVAVREEFVDDNRVKVNNDGNFVNNLSGRRGIYQAGIKASFSSSLS
EEEECCCCEECHHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCHHHHCCCCCCCCCCC
GHLGVGYSHGAGVESPWNAVAGANWSF
CCCCCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MNTIYLRCLFRSNPLVWCLRADVAAELRSLRRYYHLSNGMESKLVDTRSIYRELGATLSY
CCEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEE
NMRLGNGMKVEPWLKVAVREEFVDDNRVKVNNDGNFVNNLSGRRGIYQAGIKASFSSSLS
EEEECCCCEECHHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCHHHHCCCCCCCCCCC
GHLGVGYSHGAGVESPWNAVAGANWSF
CCCCCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]