| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is 218700213
Identifier: 218700213
GI number: 218700213
Start: 1946602
End: 1947348
Strand: Reverse
Name: 218700213
Synonym: ECIAI39_1863
Alternate gene names: NA
Gene position: 1947348-1946602 (Counterclockwise)
Preceding gene: 218700214
Following gene: 218700212
Centisome position: 37.94
GC content: 52.48
Gene sequence:
>747_bases ATGGCAACACCAAATCCCCTGGAGCCGGTAAAAGGTGCCGGTACCACTCTGTGGGTTTACAACGGCAAGGCTGATGCTTA TGCAAACCCGTTGTCAGACGATGACTGGCAGCGACTGGCTAAGGTGAAGGATCTGACGCCGGGCGAGATGACGGCTGAAT CCTACGATGATAACTACCTGGATGATGAAGACGCGGACTGGAGCGCGACCGGGCAGGGGCAGAAATCTGCAGGTGATACC AGTTTTACGCTAGCCTGGAAACCGGGAGAGGAAGGCCAGAAAGGGCTTATAGGCTGGTTTGAAAGCGGCGATGTCCGGGC CTATAAAATCCGTTTTCCGAATGGCACGGTGGATGTGTTTCGTGGCTGGGTCAGCAGTATCGGTAAGGCCGTGACGGCGA AAGAAGTGATCACCCGCACGGTGAAAGTCACTAACGTGGGTAAACCTTCTGTAGCGGAAGAACGCAGCAAAATTACGCCG GTCACTGCGATTAAGGTAACGCCGACAGGTACGGTTGAAAAAGGGAAAACAACCACCCTGACCGTTACTGTGGAACCGGA AAATGCAACGGATAAGACATTCAGGGCGATTTCCGCCGATCCATCAAAAGCCACCATTAGCGTGAAAGATATGACGATTA CTGTGACGGGGGTTAAGGATGGAAAAGTCAGCATCCCTGTGATTTCCGGTAATGGTCAGTTTGCTGCGGTGGCTGAAATT ACCGTTAATAATGTGCCGGGTGGCTAA
Upstream 100 bases:
>100_bases ATGGTTACGCAGGGCTATGAGTATCGTCGTGATGACGATATGGCGTTATGGAGTTCTGCAGATCTGACTTATTCCATTAC ATACGAGATGTGAGGACGAT
Downstream 100 bases:
>100_bases AGAGCTGAGAGATAAGCGATGTTCCTGAAAACAGAACAATTTGAATATAACGGTGTATCCGTCACGCTTTCTGAGCTGTC TGCGCTGCAGCGTATTGAGC
Product: major tail protein V
Products: NA
Alternate protein names: Gifsy-2 Prophage VmtV; Tail Protein; Tail-Like Protein; Ig Domain-Containing Domain-Containing Protein
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MATPNPLEPVKGAGTTLWVYNGKADAYANPLSDDDWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWSATGQGQKSAGDT SFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITP VTAIKVTPTGTVEKGKTTTLTVTVEPENATDKTFRAISADPSKATISVKDMTITVTGVKDGKVSIPVISGNGQFAAVAEI TVNNVPGG
Sequences:
>Translated_248_residues MATPNPLEPVKGAGTTLWVYNGKADAYANPLSDDDWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWSATGQGQKSAGDT SFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITP VTAIKVTPTGTVEKGKTTTLTVTVEPENATDKTFRAISADPSKATISVKDMTITVTGVKDGKVSIPVISGNGQFAAVAEI TVNNVPGG >Mature_247_residues ATPNPLEPVKGAGTTLWVYNGKADAYANPLSDDDWQRLAKVKDLTPGEMTAESYDDNYLDDEDADWSATGQGQKSAGDTS FTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPV TAIKVTPTGTVEKGKTTTLTVTVEPENATDKTFRAISADPSKATISVKDMTITVTGVKDGKVSIPVISGNGQFAAVAEIT VNNVPGG
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26331; Mature: 26199
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPNPLEPVKGAGTTLWVYNGKADAYANPLSDDDWQRLAKVKDLTPGEMTAESYDDNYL CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC DDEDADWSATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGTVDVF CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHH RGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVTAIKVTPTGTVEKGKTTTL HHHHHHHCCHHHHHHHHHEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEE TVTVEPENATDKTFRAISADPSKATISVKDMTITVTGVKDGKVSIPVISGNGQFAAVAEI EEEECCCCCCCHHEEEECCCCCCEEEEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEE TVNNVPGG EECCCCCC >Mature Secondary Structure ATPNPLEPVKGAGTTLWVYNGKADAYANPLSDDDWQRLAKVKDLTPGEMTAESYDDNYL CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC DDEDADWSATGQGQKSAGDTSFTLAWKPGEEGQKGLIGWFESGDVRAYKIRFPNGTVDVF CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHH RGWVSSIGKAVTAKEVITRTVKVTNVGKPSVAEERSKITPVTAIKVTPTGTVEKGKTTTL HHHHHHHCCHHHHHHHHHEEEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCCEEEE TVTVEPENATDKTFRAISADPSKATISVKDMTITVTGVKDGKVSIPVISGNGQFAAVAEI EEEECCCCCCCHHEEEECCCCCCEEEEEEEEEEEEEECCCCEEEEEEECCCCCEEEEEEE TVNNVPGG EECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA