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The map label for this gene is narV

Identifier: 218700095

GI number: 218700095

Start: 1810916

End: 1811596

Strand: Reverse

Name: narV

Synonym: ECIAI39_1727

Alternate gene names: 218700095

Gene position: 1811596-1810916 (Counterclockwise)

Preceding gene: 218700096

Following gene: 218700094

Centisome position: 35.3

GC content: 51.84

Gene sequence:

>681_bases
ATGATTCAGTATCTGAACGTCTTTTTTTACGATATCTACCCGTACTTGTGTGGCACGGTTTTTATCCTTGGAAGCTGGCT
GCGCTACGATTACGGGCAGTATACCTGGCGCGCCGCCTCCAGCCAGATGCTGGATAACCGTGGTATGGTGCTGTGGTCGA
ATCTGTTCCATATCGGCATTTTGGGGATTTTCTTCGGGCACCTGTTCGGCATGTTAACGCCGCACTGGATGTACGCGTGG
TTTTTGCCAGTGGCAGCGAAACAACTAATGGCGATGATCCTCGGCGGAATATGCGGGGTATTGACGCTGATTGGCGGTGC
GGGGCTACTGGTGCGTCGTTTAACAAATCCGCGTATCAGGGCGACGTCTTCTGGTGCGGATATCCTGATCCTCGCTATTT
TGTTAATTCAGTGCATTCTTGGGTTAACCACCATTCCTTTTTCAGCACAACATCCGGACGGCAGTGAAATGATGAAGCTG
GTGGGCTGGGCGCAAAGCATTGTCACTTTCCAGGGCGGTGCATCTACGCATCTTGATGGTGTCGCCTTTATATTCCGCGT
TCATCTGGTGCTTGGAATGACCATCTTTCTGCTCTTCCCGTTCACCCGACTGGTGCATGTCTGGAGCGCGCCGTTTGAGT
ACTTTACTCGTCGGTATCAGATTGTGCGTTCGCGGCGTTAA

Upstream 100 bases:

>100_bases
ACGCCACGGCGTGTGACAGCTCGCCGCTTAATCAATATCAGCGACGCTTTAGCCAGGATGTCGCGCCGCAGTATGTCGAC
ATCAGTGCGGGAGGTGGGAA

Downstream 100 bases:

>100_bases
TTCTCTCGCGGGCCGGATAGCTCTTCGCTCTCCGGCCACTTGCAGGCTATGATAGTTCTCCAGCCACAGGAGAACATTAA
TGAAACCGCAGGTTTACCAC

Product: nitrate reductase 2 (NRZ) subunit gamma

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MIQYLNVFFYDIYPYLCGTVFILGSWLRYDYGQYTWRAASSQMLDNRGMVLWSNLFHIGILGIFFGHLFGMLTPHWMYAW
FLPVAAKQLMAMILGGICGVLTLIGGAGLLVRRLTNPRIRATSSGADILILAILLIQCILGLTTIPFSAQHPDGSEMMKL
VGWAQSIVTFQGGASTHLDGVAFIFRVHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRSRR

Sequences:

>Translated_226_residues
MIQYLNVFFYDIYPYLCGTVFILGSWLRYDYGQYTWRAASSQMLDNRGMVLWSNLFHIGILGIFFGHLFGMLTPHWMYAW
FLPVAAKQLMAMILGGICGVLTLIGGAGLLVRRLTNPRIRATSSGADILILAILLIQCILGLTTIPFSAQHPDGSEMMKL
VGWAQSIVTFQGGASTHLDGVAFIFRVHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRSRR
>Mature_226_residues
MIQYLNVFFYDIYPYLCGTVFILGSWLRYDYGQYTWRAASSQMLDNRGMVLWSNLFHIGILGIFFGHLFGMLTPHWMYAW
FLPVAAKQLMAMILGGICGVLTLIGGAGLLVRRLTNPRIRATSSGADILILAILLIQCILGLTTIPFSAQHPDGSEMMKL
VGWAQSIVTFQGGASTHLDGVAFIFRVHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRSRR

Specific function: This is a second nitrate reductase enzyme which can substitute for the NRA enzyme and allows E.coli to use nitrate as an electron acceptor during anaerobic growth. The gamma chain is a membrane-embedded heme-iron unit resembling cytochrome b, which transf

COG id: COG2181

COG function: function code C; Nitrate reductase gamma subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787738, Length=226, Percent_Identity=88.4955752212389, Blast_Score=417, Evalue=1e-118,
Organism=Escherichia coli, GI1787480, Length=225, Percent_Identity=75.1111111111111, Blast_Score=357, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003816 [H]

Pfam domain/function: PF02665 Nitrate_red_gam [H]

EC number: =1.7.99.4 [H]

Molecular weight: Translated: 25655; Mature: 25655

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQYLNVFFYDIYPYLCGTVFILGSWLRYDYGQYTWRAASSQMLDNRGMVLWSNLFHIGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LGIFFGHLFGMLTPHWMYAWFLPVAAKQLMAMILGGICGVLTLIGGAGLLVRRLTNPRIR
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEE
ATSSGADILILAILLIQCILGLTTIPFSAQHPDGSEMMKLVGWAQSIVTFQGGASTHLDG
ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
VAFIFRVHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRSRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQYLNVFFYDIYPYLCGTVFILGSWLRYDYGQYTWRAASSQMLDNRGMVLWSNLFHIGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LGIFFGHLFGMLTPHWMYAWFLPVAAKQLMAMILGGICGVLTLIGGAGLLVRRLTNPRIR
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEE
ATSSGADILILAILLIQCILGLTTIPFSAQHPDGSEMMKLVGWAQSIVTFQGGASTHLDG
ECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHH
VAFIFRVHLVLGMTIFLLFPFTRLVHVWSAPFEYFTRRYQIVRSRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]