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The map label for this gene is yddH

Identifier: 218700092

GI number: 218700092

Start: 1808258

End: 1808827

Strand: Reverse

Name: yddH

Synonym: ECIAI39_1724

Alternate gene names: 218700092

Gene position: 1808827-1808258 (Counterclockwise)

Preceding gene: 218700094

Following gene: 218700085

Centisome position: 35.25

GC content: 51.75

Gene sequence:

>570_bases
GTGAGCCAATTCATTCCCGTCGAATTACACCATGCCAGCCGTCTGTTAAATCATGGCCCAACTGTCTTGATCACCAGTTT
CGATGAGCAATCCCAGCGGCGTAACATTATGGCTGCAGCCTGGTCAATGCCGGTGGAGTTTGAACCTCCACGCGTCGCGA
TTGTGGTAGATAAGTCGACATGGACCAGGGAGTTGATTGAGCGTAACGGTAAATTTGGCATCGTTATCCCAGGCGTTGCA
GCGACTAACTGGACGTGGGCAGTGGGAAGTGTATCTGGGCGTGAAGAGGATAAATTTAATTGCTATGGCATTCCGGTGGT
GAAAGGTCCGGTGCTTGGTTTGCCACTTGTTGAAGAGAAATGTCTGGCGTGGATGGAGTGCCGATTGCTACCAGCGACTT
CCGCGCAAGAGAAATACGACACGCTGTTTGGCGAAGTGGTATCAGCAGCGGCAGACGCACGGGTATTTGTCGAAGGCCGC
TGGCAGTTTGATGATGATAAGCTCAATACGTTGCATCATTTAGGCGCTGGCACGTTTGTTACCAGCGGCAAGCGTGTTAC
GGCAGGTTAA

Upstream 100 bases:

>100_bases
GGACATGCATCACGTTCGCAAATCGCCAATCCCGTTAATTTCGTTACTTATTGCGTTACGAGCTACGCTTTTAAAACACC
CTTCATAGCGAGGCGATATC

Downstream 100 bases:

>100_bases
GCATTACATGCTGTAACCAGGTTTCTTTATCAGCGTCTCCATTTGGGGCGCAATTTCGGCGTCCCAGATAGCTTGCCATG
ATTCTGGTTGAATCTGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSQFIPVELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIERNGKFGIVIPGVA
ATNWTWAVGSVSGREEDKFNCYGIPVVKGPVLGLPLVEEKCLAWMECRLLPATSAQEKYDTLFGEVVSAAADARVFVEGR
WQFDDDKLNTLHHLGAGTFVTSGKRVTAG

Sequences:

>Translated_189_residues
MSQFIPVELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIERNGKFGIVIPGVA
ATNWTWAVGSVSGREEDKFNCYGIPVVKGPVLGLPLVEEKCLAWMECRLLPATSAQEKYDTLFGEVVSAAADARVFVEGR
WQFDDDKLNTLHHLGAGTFVTSGKRVTAG
>Mature_188_residues
SQFIPVELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKSTWTRELIERNGKFGIVIPGVAA
TNWTWAVGSVSGREEDKFNCYGIPVVKGPVLGLPLVEEKCLAWMECRLLPATSAQEKYDTLFGEVVSAAADARVFVEGRW
QFDDDKLNTLHHLGAGTFVTSGKRVTAG

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=189, Percent_Identity=96.2962962962963, Blast_Score=381, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 20895; Mature: 20764

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQFIPVELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKST
CCCCCEEEHHHHHHHHHCCCEEEEECCCCCHHHCCEEEEEECCCEEECCCEEEEEEECCH
WTRELIERNGKFGIVIPGVAATNWTWAVGSVSGREEDKFNCYGIPVVKGPVLGLPLVEEK
HHHHHHHCCCCEEEEECCCEECCCEEEECCCCCCCCCCEEEEECCEECCCCCCCCHHHHH
CLAWMECRLLPATSAQEKYDTLFGEVVSAAADARVFVEGRWQFDDDKLNTLHHLGAGTFV
HHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCEEE
TSGKRVTAG
ECCEEEECC
>Mature Secondary Structure 
SQFIPVELHHASRLLNHGPTVLITSFDEQSQRRNIMAAAWSMPVEFEPPRVAIVVDKST
CCCCEEEHHHHHHHHHCCCEEEEECCCCCHHHCCEEEEEECCCEEECCCEEEEEEECCH
WTRELIERNGKFGIVIPGVAATNWTWAVGSVSGREEDKFNCYGIPVVKGPVLGLPLVEEK
HHHHHHHCCCCEEEEECCCEECCCEEEECCCCCCCCCCEEEEECCEECCCCCCCCHHHHH
CLAWMECRLLPATSAQEKYDTLFGEVVSAAADARVFVEGRWQFDDDKLNTLHHLGAGTFV
HHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCEEE
TSGKRVTAG
ECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]