| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is ycjT
Identifier: 218700039
GI number: 218700039
Start: 1739500
End: 1741767
Strand: Direct
Name: ycjT
Synonym: ECIAI39_1668
Alternate gene names: 218700039
Gene position: 1739500-1741767 (Clockwise)
Preceding gene: 218700038
Following gene: 218700040
Centisome position: 33.89
GC content: 53.7
Gene sequence:
>2268_bases ATGACCAGGCCAGTAACGTTAACGGAACCCCATTTCAGCCAGCATACCCTGAACAAGTATGCTTCGCTGATGGCGCAGGG GAACGGCTATCTTGGGCTTCGCGCCAGCCATGAAGAAGATTATACGCGCCAGACACGCGGTATGTATCTGGCGGGGCTTT ATCATCGCGCGGGGAAAAATGACATCAACGAACTGGTGAACCTGCCTGACGTCATAGGGATGGAGATTACCTTGAATGGT GAACTTTTTGCGCTATCCCGCGAAACGTGGCAGCGCGAGCTTGACTTCGCCAGTGGAGAATTACGTCGCAATGTCGTCTG GTCTTCAGCCAGCGGCGCACGTTATGCCATTGCCAGCCGTCGCTTTGTTTCGGCAGAACAACTGCCGCTGATGGCGCTGG AAATCAGCATTACGCCGCTGGACGCTGACGCGTCAGTGCTGATTTCAACAGGCATTGACGCCACGCAAACCAACCACGGA CGACAACATCTCGACGAAACCCAGGTGCGGGTGTTTGGTCAGCATTTGATGCAGGGGATCTATACCACTCAGGATGGACG CAGTGATGTGGCCATCAGCTGTTGCTGCCAGGTGAGCGGTGACGTGCAGCAATGCTATACCGCCAAAGAGCGCCGCTTGC TGCAACATACCAGTGCACAACTACCTGCGGGCAAAACGCTGTCGCTGCAAAAACGGGTGTGGATCGACTGGCGGGACGAC AGACACGTCGCTTTAGACGAGTGGGGTAGTGCATCGCTTCGTCAGCTTGAAATGTGTGTACAGCAGAGTTACGACCAACT TCTTGCAGCATCCACAGAAAACTGGCGTCAATGGTGGCAGAAACGTCGTATCACGGTAAACGGTGGCGATGCGCACGATC AGCAAGCGTTAGATTATGCGCTTTATCACCTACGCATCATGACGCCTGCTCACGACGAGCGCAGCAGTATTGCGGCAAAA GGTTTGACCGGGGAAGGCTACAAAGGCCACGTTTTCTGGGATACGGAAGTATTTTTACTGCCGTTCCATCTGTTTAGCGA ACCGACGATTGCCAGAAGTTTACTGCGTTATCGCTGGCACAACTTGCCAGGCGCGCAGGAGAAAGCGCGACGCAACGGCT GGCAGGGCGCGCTATTTCCGTGGGAAAGCGCGCGCAGCGGCGAAGAAGAGACGCCGGAATTTGCCGCCATTAACATTCGC ACCGGGCTGCGGCAAAAAGTAGCCTCGGCGCAGGCGGAACATCATCTGGTCGCCGATATCGCCTGGGCGGTTGTTCAATA CTGGCAGACCACGGGGGATGAAAGTTTCATTGCTCATGAAGGCATGGCGCTACTTCTGGAAACTGCAAAGTTCTGGATTA GCCGCACGGTGAGGGTTAACGACCGTCTGGAAATTCATGATGTTATTGGGCCAGACGAATATACCGAACATGTCAATAAT AACGCCTTCACCAGCTATATGGCGTATTACAACGTCCAGCAGGCGCTGAACATCGCTCGTCAATTTGGCTGTAGCGACGA TGCGTTTATCCATCGCGCCGAAATGTTCCTTAAAGAACTGCGGCTGCCAGAAATTCAGCCCGACGGCGTTTTGCCGCAGG ATGATTCGTTTATGGCGAAACCAGCGATTAATCTGGCGAAATACAAAGCGGCGGCGGGGAAGCAAACCATTCTGCTGGAT TATTCACGCGCAGAAGTGAACGAGATGCAGATCCTCAAACAAGCTGATGTGGTGATGCTCAATTACATGCTGCCGGAGCA GTACTCAGCGGCATCGTGTCTTGCCAATCTGCAATTTTATGAACCGCGCACCATTCACGACTCTTCACTGAGTAAAGCGA TCCACGGCATTGTTGCCGCACGCTGTGGCCTGTTGGCGCAAAGTTATCAGTTCTGGCGGGAGGGGACTGAAATCGATCTT GGTGCTGATCCGCATAGCTGTGATGACGGTATCCACGCTGCCGCAACTGGCGCAATCTGGTTGGGGGCGATTCAGGGTTT TGCCGGGGCGAGCGTGCGCAACGGTGAATTACATCTCAATCCGGCGTTACCTGAGCAGTGGCAACAGTTGTCTTTCCCTC TGTTCTGGCAGGGCTGTGAATTACAGGTCACTCTTGACGCGCAGCGCATTGCGATTCGGACTTCTGCGCCAGTTTCACTG CGTTTGAACGGTCAGCTTATTTCAGTCTCTGAAGAATCTGTTTTCTGTTTAGGGGATTTTATTTTGCCCTTCAATGGGAC CGCTACCACGCATCAGGAGGGTGAATGA
Upstream 100 bases:
>100_bases GCAAGCCCGTGATGATAGCCGACGCCGAGCAGGGGTACATCATCCAGCAACTGGTGGCGGCGTTGTATCAATCCGCAGAA ACAGGGACGCGTGTGGAATT
Downstream 100 bases:
>100_bases AACTGCAAGGGGTAATTTTCGATCTGGATGGAGTAATCACCGATACCGCACATCTGCATTTCCAGGCGTGGCAGCAGATT GCCGCTGAAATTGGCATCAG
Product: putative glycosyl hydrolase/phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 755; Mature: 754
Protein sequence:
>755_residues MTRPVTLTEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKNDINELVNLPDVIGMEITLNG ELFALSRETWQRELDFASGELRRNVVWSSASGARYAIASRRFVSAEQLPLMALEISITPLDADASVLISTGIDATQTNHG RQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCQVSGDVQQCYTAKERRLLQHTSAQLPAGKTLSLQKRVWIDWRDD RHVALDEWGSASLRQLEMCVQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYALYHLRIMTPAHDERSSIAAK GLTGEGYKGHVFWDTEVFLLPFHLFSEPTIARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIR TGLRQKVASAQAEHHLVADIAWAVVQYWQTTGDESFIAHEGMALLLETAKFWISRTVRVNDRLEIHDVIGPDEYTEHVNN NAFTSYMAYYNVQQALNIARQFGCSDDAFIHRAEMFLKELRLPEIQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLD YSRAEVNEMQILKQADVVMLNYMLPEQYSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLAQSYQFWREGTEIDL GADPHSCDDGIHAAATGAIWLGAIQGFAGASVRNGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL RLNGQLISVSEESVFCLGDFILPFNGTATTHQEGE
Sequences:
>Translated_755_residues MTRPVTLTEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKNDINELVNLPDVIGMEITLNG ELFALSRETWQRELDFASGELRRNVVWSSASGARYAIASRRFVSAEQLPLMALEISITPLDADASVLISTGIDATQTNHG RQHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCQVSGDVQQCYTAKERRLLQHTSAQLPAGKTLSLQKRVWIDWRDD RHVALDEWGSASLRQLEMCVQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYALYHLRIMTPAHDERSSIAAK GLTGEGYKGHVFWDTEVFLLPFHLFSEPTIARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIR TGLRQKVASAQAEHHLVADIAWAVVQYWQTTGDESFIAHEGMALLLETAKFWISRTVRVNDRLEIHDVIGPDEYTEHVNN NAFTSYMAYYNVQQALNIARQFGCSDDAFIHRAEMFLKELRLPEIQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLD YSRAEVNEMQILKQADVVMLNYMLPEQYSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLAQSYQFWREGTEIDL GADPHSCDDGIHAAATGAIWLGAIQGFAGASVRNGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL RLNGQLISVSEESVFCLGDFILPFNGTATTHQEGE >Mature_754_residues TRPVTLTEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKNDINELVNLPDVIGMEITLNGE LFALSRETWQRELDFASGELRRNVVWSSASGARYAIASRRFVSAEQLPLMALEISITPLDADASVLISTGIDATQTNHGR QHLDETQVRVFGQHLMQGIYTTQDGRSDVAISCCCQVSGDVQQCYTAKERRLLQHTSAQLPAGKTLSLQKRVWIDWRDDR HVALDEWGSASLRQLEMCVQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYALYHLRIMTPAHDERSSIAAKG LTGEGYKGHVFWDTEVFLLPFHLFSEPTIARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIRT GLRQKVASAQAEHHLVADIAWAVVQYWQTTGDESFIAHEGMALLLETAKFWISRTVRVNDRLEIHDVIGPDEYTEHVNNN AFTSYMAYYNVQQALNIARQFGCSDDAFIHRAEMFLKELRLPEIQPDGVLPQDDSFMAKPAINLAKYKAAAGKQTILLDY SRAEVNEMQILKQADVVMLNYMLPEQYSAASCLANLQFYEPRTIHDSSLSKAIHGIVAARCGLLAQSYQFWREGTEIDLG ADPHSCDDGIHAAATGAIWLGAIQGFAGASVRNGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSLR LNGQLISVSEESVFCLGDFILPFNGTATTHQEGE
Specific function: Unknown
COG id: COG1554
COG function: function code G; Trehalose and maltose hydrolases (possible phosphorylases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 65 family [H]
Homologues:
Organism=Homo sapiens, GI187829418, Length=360, Percent_Identity=28.0555555555556, Blast_Score=107, Evalue=4e-23, Organism=Escherichia coli, GI1787575, Length=755, Percent_Identity=93.7748344370861, Blast_Score=1491, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325283, Length=396, Percent_Identity=22.7272727272727, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24583760, Length=394, Percent_Identity=26.3959390862944, Blast_Score=105, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR011013 - InterPro: IPR005194 - InterPro: IPR005195 - InterPro: IPR005196 - InterPro: IPR017045 [H]
Pfam domain/function: PF03633 Glyco_hydro_65C; PF03632 Glyco_hydro_65m; PF03636 Glyco_hydro_65N [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 84869; Mature: 84738
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPVTLTEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKN CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCEEEEHHHHHCCCH DINELVNLPDVIGMEITLNGELFALSRETWQRELDFASGELRRNVVWSSASGARYAIASR HHHHHHCCCCCEEEEEEECCEEEEEEHHHHHHHHCCCCCHHHHCEEEECCCCCEEEEHHC RFVSAEQLPLMALEISITPLDADASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGI CCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YTTQDGRSDVAISCCCQVSGDVQQCYTAKERRLLQHTSAQLPAGKTLSLQKRVWIDWRDD EECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEECCC RHVALDEWGSASLRQLEMCVQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYA CEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCHHHHHHHH LYHLRIMTPAHDERSSIAAKGLTGEGYKGHVFWDTEVFLLPFHLFSEPTIARSLLRYRWH HHEEEEECCCCCCCHHHHHCCCCCCCEEEEEEECCEEEEEEHHHHCCCHHHHHHHHHHHC NLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADI CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH AWAVVQYWQTTGDESFIAHEGMALLLETAKFWISRTVRVNDRLEIHDVIGPDEYTEHVNN HHHHHHHHHCCCCCCEEHHCCHHHHHHHHHHHHHEEEEECCCEEEEECCCCHHHHHHCCC NAFTSYMAYYNVQQALNIARQFGCSDDAFIHRAEMFLKELRLPEIQPDGVLPQDDSFMAK CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PAINLAKYKAAAGKQTILLDYSRAEVNEMQILKQADVVMLNYMLPEQYSAASCLANLQFY CCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHCCEEC EPRTIHDSSLSKAIHGIVAARCGLLAQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHH LGAIQGFAGASVRNGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL HHHHHCCCCCCEECCEEEECCCCCHHHHHCCCCEEECCCEEEEEECCEEEEEEECCCEEE RLNGQLISVSEESVFCLGDFILPFNGTATTHQEGE EECCEEEEECCCCEEEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure TRPVTLTEPHFSQHTLNKYASLMAQGNGYLGLRASHEEDYTRQTRGMYLAGLYHRAGKN CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCEEEEHHHHHCCCH DINELVNLPDVIGMEITLNGELFALSRETWQRELDFASGELRRNVVWSSASGARYAIASR HHHHHHCCCCCEEEEEEECCEEEEEEHHHHHHHHCCCCCHHHHCEEEECCCCCEEEEHHC RFVSAEQLPLMALEISITPLDADASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGI CCCCCCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YTTQDGRSDVAISCCCQVSGDVQQCYTAKERRLLQHTSAQLPAGKTLSLQKRVWIDWRDD EECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEECCC RHVALDEWGSASLRQLEMCVQQSYDQLLAASTENWRQWWQKRRITVNGGDAHDQQALDYA CEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCHHHHHHHH LYHLRIMTPAHDERSSIAAKGLTGEGYKGHVFWDTEVFLLPFHLFSEPTIARSLLRYRWH HHEEEEECCCCCCCHHHHHCCCCCCCEEEEEEECCEEEEEEHHHHCCCHHHHHHHHHHHC NLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADI CCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH AWAVVQYWQTTGDESFIAHEGMALLLETAKFWISRTVRVNDRLEIHDVIGPDEYTEHVNN HHHHHHHHHCCCCCCEEHHCCHHHHHHHHHHHHHEEEEECCCEEEEECCCCHHHHHHCCC NAFTSYMAYYNVQQALNIARQFGCSDDAFIHRAEMFLKELRLPEIQPDGVLPQDDSFMAK CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PAINLAKYKAAAGKQTILLDYSRAEVNEMQILKQADVVMLNYMLPEQYSAASCLANLQFY CCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHCCEEC EPRTIHDSSLSKAIHGIVAARCGLLAQSYQFWREGTEIDLGADPHSCDDGIHAAATGAIW CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHH LGAIQGFAGASVRNGELHLNPALPEQWQQLSFPLFWQGCELQVTLDAQRIAIRTSAPVSL HHHHHCCCCCCEECCEEEECCCCCHHHHHCCCCEEECCCEEEEEECCEEEEEEECCCEEE RLNGQLISVSEESVFCLGDFILPFNGTATTHQEGE EECCEEEEECCCCEEEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]