Click here to switch to the map view.

The map label for this gene is prrA

Identifier: 218699898

GI number: 218699898

Start: 1593809

End: 1595800

Strand: Reverse

Name: prrA

Synonym: ECIAI39_1527

Alternate gene names: 218699898

Gene position: 1595800-1593809 (Counterclockwise)

Preceding gene: 218699899

Following gene: 218699896

Centisome position: 31.09

GC content: 49.65

Gene sequence:

>1992_bases
TTGTTAAACGGAATTTATTCTATGAGACTCAAAAAACGTTATCTCTGCACAGCATTATCACTTGCCTTTACCCAGCAGGC
CGTAGCGGCTCAGGAGAGCGACACGCTGACCGTATGGTCCAGTCCGGTATCATCGACGACGACCACCGTTCTCGATCAAC
CCACCATGAAGGCCCTGGATAAACAGAATGTCGCTCAGGCATTAAGTGTCGTCCCCGGCGTGGTGCTGCAAAAGTCAGGT
AGCCGCAACGAAGAACAGGTCAAAGTTCGTGGCTTTGATAGTCGTCAGGTGCCAGTCTATTTCGACGGTGTGCCCATTTA
TGTTCCCTATGACGGCAACCTCGATCTGGCGCGGATTCTGACCAACAATTTGGGGGCAGTTGAAGTTTCCAAAGGGTATT
CGTCGCTGCTTCAGGGGCCTAATCAGATGGGCGGAGCCATTAATATCACCACCCAGAAGCCAACAAAACCTCTGGAAGCA
AGTCTGGGATATCGCCAGGGATGGAGCCGTAGCCAGGACAATGCCTACGATATGCATGCTTCATTTGCCGCCAGCAGCGA
TCTGGGGTATTTGCAAGTCAGCGGTAGCCAGCTAAAGCAGGATTTTCTCGGCCTGCCGCATGGTGTAAATAATGATATTG
CAGGCAAACACGGCAAGATGATTAATTCATCGGCTGATGATAAACGCGGCATTGTGAAGCTCGGTTTTACACCACGCGAA
AACGATGAATACACATTGACTTACATTAAGCAGGATGGTGAAAAAGATAACCCGCCATACAGTGGAAATAGTGGTCAAAA
ATCACGCTACTGGCAGTGGCCAGAGTATGACAAAGAAAGTTTTTATTATCAGGGAACGACCCAACTAAACGATCGTTTTA
CCCTGAAAAGTCGGCTGTATCGCGACACCTTTGAAAATACGCTAATGATGTACAACTCGCTGGCTGATTTGAAAAATAAA
AAAGGCAGCTACAGCCATTATTCCGATTACAGCGACGGTGCCGGGTTACAACTGGCAGCCGATGTGCGTGAAAACGATCT
GCTGTCGTTTGCCGTTAACTGGAAAGATGACGTACACCGGGAAAAAGGTGCGCCACACGCCGCTTACGATCGCTATGAAG
ATCGTACCTGGTCGCTCGCCAGTGAATATCAATGGGCTGCTGCCGATAATGTCGATGTCGTGGCTGGAATCAGCTATGAC
TGGCGCGATAGCGTAGAAGCGAAAAAACATGAGAAAGATGGCAGTATCACCCATTATGACGACAACAATCAGTCAGCTTT
TAACTGGCAGGTGATGGGGAAATACCACTTTGCCAATGAAGACACGCTGGCGCTTTCGTACTATGACCGCACACGCTTTC
CGACGCTGAAAGAACGCTATACCACGTCCAAACCTGCGTATAACCAGATAGCGATTGTTAACCCGCAGCTCAAGCCGGAA
CGCGCGCGCGGGGTGGATTTAACCTGGAATGGTGCCTTCACGCACGACTGGGGATTTGAGGTCAGCGTTTACTATAACCG
GGTGAGTGATGCCATCCTCTCGCACAATATCGATGCCGATACCATTCAAAATCAGAACAGCGGCACGGTGGATTACAGCG
GTCTGGATGCCGGTATTAAGGGGAAAATCAGCAATATACTGGATGTAGGATTGAGCTACGCCCTGATCCACGCTGATGCC
AAACGTAAAGACATCGGCAAGATAACCGATCTGCCAACGCAGACAATGACCGCATGGATGACTCTCAAACCGTGGGAGCC
GTTAAGCGTAACGCTGTCGGAAGAGGCGCGTTCCTCCAGCTACAGCAACAGTGACGGTTCACAAAAAGCCGCCGGTTTTG
CGGTGACTCACATTCGAGCCGATTACACCTTAGGTCATGGCTTCAGCGTCAATGCGTCGGTCAATAACCTGTTTGATACC
AAATATGCCTACAGTGAAGGGTTTATTGAAGAAGGTCGCAATTTCTGGGCAGGTATCGAGTATACGTTCTGA

Upstream 100 bases:

>100_bases
CTCGACTGCGGCATTCGCCTTTTTATTACCTCCGCGCCTTATTACGCGACACCAGCTGACATTAAAGTCAGTCTGCAACC
CGCAGCCTCTATTTAATTCT

Downstream 100 bases:

>100_bases
TGTGAAAGCGGATAGCGGCATCTGTATCACTATCCGCCTTATGAAAATCTTATTCTCTTCGCAGGAGGCGGAATACGCCC
AGCACCAGGATAGCGCCCAC

Product: putative outer membrane receptor

Products: NA

Alternate protein names: NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Plug; Outer Membrane Receptor For Ferrienterochelin And Colicins; Outer Membrane Receptor For Fe Transport; Outer Membrane Receptor Protein; NB Dependent Outer Membrane Receptor; NB-Like Outer Membrane Receptor Protein; Nb-Dependent Siderophore Receptor; Nb-Dependent Receptor; Outer Membrane Receptor Probably nB Dependent; TONB-Dependent Outer Membrane Receptor

Number of amino acids: Translated: 663; Mature: 663

Protein sequence:

>663_residues
MLNGIYSMRLKKRYLCTALSLAFTQQAVAAQESDTLTVWSSPVSSTTTTVLDQPTMKALDKQNVAQALSVVPGVVLQKSG
SRNEEQVKVRGFDSRQVPVYFDGVPIYVPYDGNLDLARILTNNLGAVEVSKGYSSLLQGPNQMGGAINITTQKPTKPLEA
SLGYRQGWSRSQDNAYDMHASFAASSDLGYLQVSGSQLKQDFLGLPHGVNNDIAGKHGKMINSSADDKRGIVKLGFTPRE
NDEYTLTYIKQDGEKDNPPYSGNSGQKSRYWQWPEYDKESFYYQGTTQLNDRFTLKSRLYRDTFENTLMMYNSLADLKNK
KGSYSHYSDYSDGAGLQLAADVRENDLLSFAVNWKDDVHREKGAPHAAYDRYEDRTWSLASEYQWAAADNVDVVAGISYD
WRDSVEAKKHEKDGSITHYDDNNQSAFNWQVMGKYHFANEDTLALSYYDRTRFPTLKERYTTSKPAYNQIAIVNPQLKPE
RARGVDLTWNGAFTHDWGFEVSVYYNRVSDAILSHNIDADTIQNQNSGTVDYSGLDAGIKGKISNILDVGLSYALIHADA
KRKDIGKITDLPTQTMTAWMTLKPWEPLSVTLSEEARSSSYSNSDGSQKAAGFAVTHIRADYTLGHGFSVNASVNNLFDT
KYAYSEGFIEEGRNFWAGIEYTF

Sequences:

>Translated_663_residues
MLNGIYSMRLKKRYLCTALSLAFTQQAVAAQESDTLTVWSSPVSSTTTTVLDQPTMKALDKQNVAQALSVVPGVVLQKSG
SRNEEQVKVRGFDSRQVPVYFDGVPIYVPYDGNLDLARILTNNLGAVEVSKGYSSLLQGPNQMGGAINITTQKPTKPLEA
SLGYRQGWSRSQDNAYDMHASFAASSDLGYLQVSGSQLKQDFLGLPHGVNNDIAGKHGKMINSSADDKRGIVKLGFTPRE
NDEYTLTYIKQDGEKDNPPYSGNSGQKSRYWQWPEYDKESFYYQGTTQLNDRFTLKSRLYRDTFENTLMMYNSLADLKNK
KGSYSHYSDYSDGAGLQLAADVRENDLLSFAVNWKDDVHREKGAPHAAYDRYEDRTWSLASEYQWAAADNVDVVAGISYD
WRDSVEAKKHEKDGSITHYDDNNQSAFNWQVMGKYHFANEDTLALSYYDRTRFPTLKERYTTSKPAYNQIAIVNPQLKPE
RARGVDLTWNGAFTHDWGFEVSVYYNRVSDAILSHNIDADTIQNQNSGTVDYSGLDAGIKGKISNILDVGLSYALIHADA
KRKDIGKITDLPTQTMTAWMTLKPWEPLSVTLSEEARSSSYSNSDGSQKAAGFAVTHIRADYTLGHGFSVNASVNNLFDT
KYAYSEGFIEEGRNFWAGIEYTF
>Mature_663_residues
MLNGIYSMRLKKRYLCTALSLAFTQQAVAAQESDTLTVWSSPVSSTTTTVLDQPTMKALDKQNVAQALSVVPGVVLQKSG
SRNEEQVKVRGFDSRQVPVYFDGVPIYVPYDGNLDLARILTNNLGAVEVSKGYSSLLQGPNQMGGAINITTQKPTKPLEA
SLGYRQGWSRSQDNAYDMHASFAASSDLGYLQVSGSQLKQDFLGLPHGVNNDIAGKHGKMINSSADDKRGIVKLGFTPRE
NDEYTLTYIKQDGEKDNPPYSGNSGQKSRYWQWPEYDKESFYYQGTTQLNDRFTLKSRLYRDTFENTLMMYNSLADLKNK
KGSYSHYSDYSDGAGLQLAADVRENDLLSFAVNWKDDVHREKGAPHAAYDRYEDRTWSLASEYQWAAADNVDVVAGISYD
WRDSVEAKKHEKDGSITHYDDNNQSAFNWQVMGKYHFANEDTLALSYYDRTRFPTLKERYTTSKPAYNQIAIVNPQLKPE
RARGVDLTWNGAFTHDWGFEVSVYYNRVSDAILSHNIDADTIQNQNSGTVDYSGLDAGIKGKISNILDVGLSYALIHADA
KRKDIGKITDLPTQTMTAWMTLKPWEPLSVTLSEEARSSSYSNSDGSQKAAGFAVTHIRADYTLGHGFSVNASVNNLFDT
KYAYSEGFIEEGRNFWAGIEYTF

Specific function: Cobalamin Receptor Protein. Also Acts As A Receptor For Bacteriophage Bf23 And Is Necessary For The Uptake Of E Colicins. [C]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 74239; Mature: 74239

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS01156 TONB_DEPENDENT_REC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNGIYSMRLKKRYLCTALSLAFTQQAVAAQESDTLTVWSSPVSSTTTTVLDQPTMKALD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCHHHHHHH
KQNVAQALSVVPGVVLQKSGSRNEEQVKVRGFDSRQVPVYFDGVPIYVPYDGNLDLARIL
HHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCEEECCEEEEEECCCCCCHHHHH
TNNLGAVEVSKGYSSLLQGPNQMGGAINITTQKPTKPLEASLGYRQGWSRSQDNAYDMHA
HCCCCEEEECCCHHHHHCCHHHCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCEEEEE
SFAASSDLGYLQVSGSQLKQDFLGLPHGVNNDIAGKHGKMINSSADDKRGIVKLGFTPRE
HHCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
NDEYTLTYIKQDGEKDNPPYSGNSGQKSRYWQWPEYDKESFYYQGTTQLNDRFTLKSRLY
CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEHHHHHHH
RDTFENTLMMYNSLADLKNKKGSYSHYSDYSDGAGLQLAADVRENDLLSFAVNWKDDVHR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHH
EKGAPHAAYDRYEDRTWSLASEYQWAAADNVDVVAGISYDWRDSVEAKKHEKDGSITHYD
HCCCCCHHHHCCCCCCCCHHHCEEEECCCCCEEEEECCCCCCCCCHHHHHCCCCCEEEEC
DNNQSAFNWQVMGKYHFANEDTLALSYYDRTRFPTLKERYTTSKPAYNQIAIVNPQLKPE
CCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCCCEEEEECCCCCCH
RARGVDLTWNGAFTHDWGFEVSVYYNRVSDAILSHNIDADTIQNQNSGTVDYSGLDAGIK
HCCCCEEEECCCEEECCCEEEEEEEHHHHHHHHHCCCCHHHCCCCCCCEEEECCCCCCCC
GKISNILDVGLSYALIHADAKRKDIGKITDLPTQTMTAWMTLKPWEPLSVTLSEEARSSS
CHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECHHHCCCC
YSNSDGSQKAAGFAVTHIRADYTLGHGFSVNASVNNLFDTKYAYSEGFIEEGRNFWAGIE
CCCCCCCCHHCCEEEEEEEEEEEECCCEEECCCHHHHHCCHHHHHCCHHHCCCCEEEEEE
YTF
ECC
>Mature Secondary Structure
MLNGIYSMRLKKRYLCTALSLAFTQQAVAAQESDTLTVWSSPVSSTTTTVLDQPTMKALD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEECCHHHHHHH
KQNVAQALSVVPGVVLQKSGSRNEEQVKVRGFDSRQVPVYFDGVPIYVPYDGNLDLARIL
HHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCCCEEECCEEEEEECCCCCCHHHHH
TNNLGAVEVSKGYSSLLQGPNQMGGAINITTQKPTKPLEASLGYRQGWSRSQDNAYDMHA
HCCCCEEEECCCHHHHHCCHHHCCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCEEEEE
SFAASSDLGYLQVSGSQLKQDFLGLPHGVNNDIAGKHGKMINSSADDKRGIVKLGFTPRE
HHCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCC
NDEYTLTYIKQDGEKDNPPYSGNSGQKSRYWQWPEYDKESFYYQGTTQLNDRFTLKSRLY
CCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEHHHHHHH
RDTFENTLMMYNSLADLKNKKGSYSHYSDYSDGAGLQLAADVRENDLLSFAVNWKDDVHR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHH
EKGAPHAAYDRYEDRTWSLASEYQWAAADNVDVVAGISYDWRDSVEAKKHEKDGSITHYD
HCCCCCHHHHCCCCCCCCHHHCEEEECCCCCEEEEECCCCCCCCCHHHHHCCCCCEEEEC
DNNQSAFNWQVMGKYHFANEDTLALSYYDRTRFPTLKERYTTSKPAYNQIAIVNPQLKPE
CCCCCEEEEEEEEEEEECCCCEEEEEEECCCCCCCHHHHCCCCCCCCCEEEEECCCCCCH
RARGVDLTWNGAFTHDWGFEVSVYYNRVSDAILSHNIDADTIQNQNSGTVDYSGLDAGIK
HCCCCEEEECCCEEECCCEEEEEEEHHHHHHHHHCCCCHHHCCCCCCCEEEECCCCCCCC
GKISNILDVGLSYALIHADAKRKDIGKITDLPTQTMTAWMTLKPWEPLSVTLSEEARSSS
CHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECHHHCCCC
YSNSDGSQKAAGFAVTHIRADYTLGHGFSVNASVNNLFDTKYAYSEGFIEEGRNFWAGIE
CCCCCCCCHHCCEEEEEEEEEEEECCCEEECCCHHHHHCCHHHHHCCHHHCCCCEEEEEE
YTF
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA