| Definition | Escherichia coli IAI39 chromosome, complete genome. |
|---|---|
| Accession | NC_011750 |
| Length | 5,132,068 |
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The map label for this gene is yebT
Identifier: 218699595
GI number: 218699595
Start: 1283598
End: 1286231
Strand: Reverse
Name: yebT
Synonym: ECIAI39_1216
Alternate gene names: 218699595
Gene position: 1286231-1283598 (Counterclockwise)
Preceding gene: 218699596
Following gene: 218699594
Centisome position: 25.06
GC content: 53.38
Gene sequence:
>2634_bases ATGAGTCAGGAAACGCCCGCTTCGACGACTGAAGCGCAGATTAAAAATAAACGCCGTATCTCACCTTTCTGGCTGCTGCC GATCATCGCGCTAATGATTGCCGGTTGGCTGATTTGGGACAGTTATCAGGACCGGGGTAATACTGTCACCATCGACTTTA TGTCGGCGGATGGTATTGTTCCAGGCCGTACGCCTGTTCGTTATCAGGGCGTTGAAGTTGGAACAGTGCAGGATATCAGC CTCAGCGACGATCTTCGTAAGATTGAAGTCAAGGTCAGCATCAAGTCCGATATGAAAGATGCGCTGCGCGAAGAGACACA GTTCTGGTTGGTGACGCCAAAGGCCTCGTTGGCAGGTGTCTCCGGGCTGGACGCCCTCGTCGGTGGTAATTATATCGGCA TGATGCCGGGTAAAGGTAAAGAGCAGGATCACTTTGTCGCACTCGACACCCAACCGAAATATCGGCTGGACAATGGCGAT CTGATGATCCACCTGCAAGCCCCCGATCTCGGTTCACTGAGCAGTGGTTCATTGGTCTATTTCCGCAAGATCCCGGTGGG TAAAGTCTACGACTATGCCATCAATCCCAACAAGCAAGGCGTGGTGATTGATGTCCTGATCGAGCGGCGTTTTACCGATC TGGTGAAAAAAGGTAGCCGTTTCTGGAACGTTTCCGGCGTTGATGCCAACGTCAGTATCAGTGGCGCGAAGGTGAAACTG GAAAGTCTGGCGGCACTGGTTAACGGTGCGATTGCCTTCGATTCACCTGAAGAGTCGAAACCTGCCGAGGCGGAAGATAC CTTTGGTCTGTATGAAGACCTGGCCCATAGCCAACGTGGCGTAATAATAAAACTGGAACTGCCAGGCGGTGCCGGATTAA CCGCCGACTCGACGCCGTTAATGTATCAGGGGCTGGAAGTCGGACAGCTAACTAAACTGGATTTAAATCCTGGTGGTAAA GTCACTGGGGAAATGACCGTTGATCCCAGCGTCGTTACCCTGCTTCGTGAAAATACCCGCATCGAATTACGCAACCCGAA ATTATCCCTTAGCGATGCCAATCTCAGCGCCCTGCTGACTGGCAAAACCTTCGAGTTGGTGCCCGGCGATGGCGAGCCAC GCAAAGAGTTCGTTGTTGTGCCAGGCGAAAAAGCACTGCTGCATGAACCTGATGTTCTGACACTGACCCTGACAGCACCG GAAAGTTACGGTATTGATGCTGGTCAGCCGCTCATTCTTCACGGCGTGCAGGTAGGCCAGGTTATTGATCGTAAACTCAC CAGCAAAGGCGTCACCTTTACCGTCGCCATCGAGCCTCAGCATCGAGAACTGGTAAAAGGCGATAGCAAATTTGTCGTCA ACAGCCGTGTCGACGTGAAGGTGGGGCTGGATGGCGTTGAGTTTCTCGGAGCCAGCGCCTCAGAATGGATTAATGGCGGG ATACGTATTCTGCCGGGCGATAAAGGCGAGATGAAAGCCAGCTATCCACTGTATGCCAATCTGGAAAAAGCGCTGGAGAA CAGCCTTAGCGATTTACCCACCACAACCGTGAGTTTGAGTGCAGAGACGCTGCCGGATGTGCAGGCAGGATCGGTAGTGC TGTACCGTAAATTTGAAGTTGGTGAAGTTATTACCGTGCGTCCGCGAGCTAACGCGTTTGATATCGATCTGCATATTAAG CCGGAGTATCGCAACCTTCTGACCAGCAATAGCGTGTTCTGGGCAGAAGGCGGGGCGAAAGTTCAGCTGAATGGTAGTGG CCTGACCGTACAGGCATCCCCGCTCTCCAGAGCATTAAAGGGAGCCATTAGCTTCGATAACCTCAGCGGTGCCAGCGCCA GTCAGCGTAAAGGCGACAAATGTATTCTGTATGCTTCCGAAACAGCGGCCCGTGCGGTTGGCGGGCAGATTACGCTTCAC GCTTTCGATGCCGGAAAACTGGCGGTCGGGATGCCAATTCGCTATCTCGGTATTGATATCGGGCAAATCCAGACGCTGGA TCTGATTACCGCGCGCAATGAAGTGCAGGCAAAAGCGGTGCTCTATCCGGAGTATGTCCAGACCTTCGCCCGCGGCGGTA CGCGCTTCTCGGTGGTCACACCGCAAATTTCAGCCGCGGGCGTTGAGCATCTTGATACCATCCTCCAGCCGTATATCAAC GTCGAACCAGGTCGGGGTAATCCTCACCGCGACTTTGAGTTGCAAGAAGCCACCATTACTGATTCGCGTTACCTGGATGG CTTAAGCATTATTGTTGAAGCGCCTGAAGCCGGTTCGTTAGGTATTGGTACGCCTGTGCTGTTCCGTGGTCTGGAAGTCG GTACGGTTACCGGAATGACGCTGGGGACATTGTCTGATCGCGTGATGATTGCGATGCGCATCAGTAAACGCTATCAACAC CTGGTGCGCAACAATTCCGTCTTCTGGTTGGCATCAGGTTACAGTCTGGACTTTGGTCTGACGGGCGGCGTAGTGAAAAC CGGCACCTTTAACCAATTTATCCGTGGCGGCATCGCCTTCGCCACGCCTCCGGGTACGCCACTGGCACCGAAAGCCCAGG AAGGCAAGCACTTCCTGTTGCAGGAAAGTGAACCGAAAGAGTGGCGTGAATGGGGAACAGCGCTTCCCAAATAA
Upstream 100 bases:
>100_bases GCTTTTACTATGGGACCGGCTGCGTTTTATTTCGGCGCAGCGGTAATTTTGACTATTCTTGCTGTGGAATGGCTGGACAG CCGCTTACTTTGGGATGCAC
Downstream 100 bases:
>100_bases TGCCCACTGCTCCGGCGTGCCTGCGCCGGAGCGTTTATGCTAAACTGCGCGCCTGTTTTTTTGCCAGTGGTACATGCTCG TGGCCCAACACACCGTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 877; Mature: 876
Protein sequence:
>877_residues MSQETPASTTEAQIKNKRRISPFWLLPIIALMIAGWLIWDSYQDRGNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDIS LSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGD LMIHLQAPDLGSLSSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKL ESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPGGAGLTADSTPLMYQGLEVGQLTKLDLNPGGK VTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLTAP ESYGIDAGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWINGG IRILPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIK PEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKCILYASETAARAVGGQITLH AFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYIN VEPGRGNPHRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRYQH LVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK
Sequences:
>Translated_877_residues MSQETPASTTEAQIKNKRRISPFWLLPIIALMIAGWLIWDSYQDRGNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDIS LSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGD LMIHLQAPDLGSLSSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKL ESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPGGAGLTADSTPLMYQGLEVGQLTKLDLNPGGK VTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLTAP ESYGIDAGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWINGG IRILPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIK PEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKCILYASETAARAVGGQITLH AFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYIN VEPGRGNPHRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRYQH LVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK >Mature_876_residues SQETPASTTEAQIKNKRRISPFWLLPIIALMIAGWLIWDSYQDRGNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISL SDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGDL MIHLQAPDLGSLSSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKLE SLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPGGAGLTADSTPLMYQGLEVGQLTKLDLNPGGKV TGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLTAPE SYGIDAGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWINGGI RILPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIKP EYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKCILYASETAARAVGGQITLHA FDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYINV EPGRGNPHRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRYQHL VRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK
Specific function: Unknown
COG id: COG3008
COG function: function code R; Paraquat-inducible protein B
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqiB family [H]
Homologues:
Organism=Escherichia coli, GI87081984, Length=877, Percent_Identity=99.3158494868871, Blast_Score=1759, Evalue=0.0, Organism=Escherichia coli, GI1787184, Length=267, Percent_Identity=33.3333333333333, Blast_Score=164, Evalue=3e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003399 [H]
Pfam domain/function: PF02470 MCE [H]
EC number: NA
Molecular weight: Translated: 94778; Mature: 94647
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQETPASTTEAQIKNKRRISPFWLLPIIALMIAGWLIWDSYQDRGNTVTIDFMSADGIV CCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEECCCCC PGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGV CCCCCCEECCEEECEEEECCCCCCCEEEEEEEEEHHHHHHHHHCCCEEEEEECCHHHCCC SGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGDLMIHLQAPDLGSLSSGSLVY CCCHHHHCCCEEEECCCCCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCEEE FRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKL EEECCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHCCCCEEEEECCCCEEEECCCEEEH ESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPGGAGLTADSTPL HHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC MYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLT EECCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCEEEEECCEEEECCCCEEEEEE GKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLTAPESYGIDAGQPLILHGVQVGQ CCEEEEECCCCCCCCCEEEECCCHHEEECCCEEEEEEECCCCCCCCCCCCEEEECCHHHH VIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWINGG HHHHHHHCCCCEEEEEECCCHHHHHCCCCEEEEECEEEEEECCCHHHHHCCCHHHHHCCC IRILPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEV EEEEECCCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCEEEEEEECC GEVITVRPRANAFDIDLHIKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALK CCEEEEECCCCEEEEEEEECCHHHHHHCCCCEEEECCCCEEEECCCCEEEECCHHHHHHH GAISFDNLSGASASQRKGDKCILYASETAARAVGGQITLHAFDAGKLAVGMPIRYLGIDI CCEEECCCCCCCCHHCCCCEEEEEECCHHHHHCCCEEEEEEECCCCEEECCCEEEECCCC GQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYIN CCEEEEEEEECCCCCCEEEEECHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHCCCEE VEPGRGNPHRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMT ECCCCCCCCCCCEEEEEEECCCHHCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEECCEE LGTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAF EECCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEECCCHHHHHHCCEEE ATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK ECCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCC >Mature Secondary Structure SQETPASTTEAQIKNKRRISPFWLLPIIALMIAGWLIWDSYQDRGNTVTIDFMSADGIV CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHEECCCCCCCCEEEEEEEECCCCC PGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDALREETQFWLVTPKASLAGV CCCCCCEECCEEECEEEECCCCCCCEEEEEEEEEHHHHHHHHHCCCEEEEEECCHHHCCC SGLDALVGGNYIGMMPGKGKEQDHFVALDTQPKYRLDNGDLMIHLQAPDLGSLSSGSLVY CCCHHHHCCCEEEECCCCCCCCCCEEEEECCCCEEECCCCEEEEEECCCCCCCCCCCEEE FRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVDANVSISGAKVKL EEECCCCCEEEEEECCCCCCEEEEEEHHHHHHHHHHCCCCEEEEECCCCEEEECCCEEEH ESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAHSQRGVIIKLELPGGAGLTADSTPL HHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCC MYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTLLRENTRIELRNPKLSLSDANLSALLT EECCCCCCCEEEEECCCCCEEEEEEEECCCEEEEEECCCEEEEECCEEEECCCCEEEEEE GKTFELVPGDGEPRKEFVVVPGEKALLHEPDVLTLTLTAPESYGIDAGQPLILHGVQVGQ CCEEEEECCCCCCCCCEEEECCCHHEEECCCEEEEEEECCCCCCCCCCCCEEEECCHHHH VIDRKLTSKGVTFTVAIEPQHRELVKGDSKFVVNSRVDVKVGLDGVEFLGASASEWINGG HHHHHHHCCCCEEEEEECCCHHHHHCCCCEEEEECEEEEEECCCHHHHHCCCHHHHHCCC IRILPGDKGEMKASYPLYANLEKALENSLSDLPTTTVSLSAETLPDVQAGSVVLYRKFEV EEEEECCCCCCEECCCHHHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCCEEEEEEECC GEVITVRPRANAFDIDLHIKPEYRNLLTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALK CCEEEEECCCCEEEEEEEECCHHHHHHCCCCEEEECCCCEEEECCCCEEEECCHHHHHHH GAISFDNLSGASASQRKGDKCILYASETAARAVGGQITLHAFDAGKLAVGMPIRYLGIDI CCEEECCCCCCCCHHCCCCEEEEEECCHHHHHCCCEEEEEEECCCCEEECCCEEEECCCC GQIQTLDLITARNEVQAKAVLYPEYVQTFARGGTRFSVVTPQISAAGVEHLDTILQPYIN CCEEEEEEEECCCCCCEEEEECHHHHHHHHCCCCEEEEECCCHHHCCHHHHHHHHCCCEE VEPGRGNPHRDFELQEATITDSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMT ECCCCCCCCCCCEEEEEEECCCHHCCCEEEEEECCCCCCCCCCCHHHHCCCEEEEECCEE LGTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAF EECCCCEEEEEEHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEECCCHHHHHHCCEEE ATPPGTPLAPKAQEGKHFLLQESEPKEWREWGTALPK ECCCCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]