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The map label for this gene is yobB

Identifier: 218699586

GI number: 218699586

Start: 1277647

End: 1278303

Strand: Reverse

Name: yobB

Synonym: ECIAI39_1207

Alternate gene names: 218699586

Gene position: 1278303-1277647 (Counterclockwise)

Preceding gene: 218699587

Following gene: 218699585

Centisome position: 24.91

GC content: 52.21

Gene sequence:

>657_bases
ATGTCGTTCTGGAAAGTTGCAGCAGCGCAATATGAGCCCCGTAAAACCTCACTCACCGAACAGGTAGCTCATCATCTGGA
GTTTGTGAGGGCCGCCGCCAGGCAACAATGTCAGCTGTTAGTTTTTCCATCGCTTTCTTTACTGGGGTGTGATTATTCGC
GACGTGCCCTTCCTGCCCCACCCGATCTCTCGCTATTAGACCCGCTTTGTTATGCCGCAACGACCTGGCGAATGACCATC
ATTGCCGGCCTTCCCGTTGAATATAACGATCGCTTTATTCGTGGAATTGCGGTGTTCGCACCGTGGCGTAAAACACCTGG
GATCTACCATCAGAGTCATGGTGCATGTCTGGGCCGTCGTTCCAGAACCATCACGGTGGTCGATGAACAACCGGAAGGTA
TGGATATGGACCCGACCTGTTCACTGTTTACGACAGGGCAATGTCTGGGAGAACCCGACCTGCTGGCGTCGGCCCGTCGC
TTACAATTTTTTTCACATCAGTACTCGATTGCTGTGCTGATGGCAAATGCCCGTGGTAACAGTGCACTATGGGATGAACA
TGGTCGTCTCATCGTTCGCGCCGATCGTGGTTCATTATTGTTAGTCGGTCAGCGTTCATCACAGGGTTGGCAAGGCGATA
TCATTCCATTACGCTAG

Upstream 100 bases:

>100_bases
ACTTATACATAGTTACACTTTCTTACATAACGCCTGCTAAATTATGAGTATTTTCTAAACCGCACCCATAATTTGCAGTC
ATTTTGAAAAGGAAGTCATT

Downstream 100 bases:

>100_bases
GCTTTTTCAGCTTGGAGCATGCCATGTTGCGCATTATCGATACAGAAACCTGCGGTTTGCAGGGAGGGATCGTTGAGATT
GCCTCTGTTGATGTCATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPSLSLLGCDYSRRALPAPPDLSLLDPLCYAATTWRMTI
IAGLPVEYNDRFIRGIAVFAPWRKTPGIYHQSHGACLGRRSRTITVVDEQPEGMDMDPTCSLFTTGQCLGEPDLLASARR
LQFFSHQYSIAVLMANARGNSALWDEHGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR

Sequences:

>Translated_218_residues
MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPSLSLLGCDYSRRALPAPPDLSLLDPLCYAATTWRMTI
IAGLPVEYNDRFIRGIAVFAPWRKTPGIYHQSHGACLGRRSRTITVVDEQPEGMDMDPTCSLFTTGQCLGEPDLLASARR
LQFFSHQYSIAVLMANARGNSALWDEHGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR
>Mature_217_residues
SFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPSLSLLGCDYSRRALPAPPDLSLLDPLCYAATTWRMTII
AGLPVEYNDRFIRGIAVFAPWRKTPGIYHQSHGACLGRRSRTITVVDEQPEGMDMDPTCSLFTTGQCLGEPDLLASARRL
QFFSHQYSIAVLMANARGNSALWDEHGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788148, Length=218, Percent_Identity=99.0825688073395, Blast_Score=447, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: NA

Molecular weight: Translated: 24370; Mature: 24239

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPSLSLLGCDYSRRALPAP
CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEECCCCCCCCCCCC
PDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPWRKTPGIYHQSHGACLGRR
CCCHHHHHHHHHHHHEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCEECCC
SRTITVVDEQPEGMDMDPTCSLFTTGQCLGEPDLLASARRLQFFSHQYSIAVLMANARGN
CCEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCC
SALWDEHGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR
CCEECCCCCEEEEECCCCEEEEECCCCCCCCCCEEECC
>Mature Secondary Structure 
SFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPSLSLLGCDYSRRALPAP
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEECCCCCCCCCCCC
PDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPWRKTPGIYHQSHGACLGRR
CCCHHHHHHHHHHHHEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCEECCCCCEECCC
SRTITVVDEQPEGMDMDPTCSLFTTGQCLGEPDLLASARRLQFFSHQYSIAVLMANARGN
CCEEEEEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCC
SALWDEHGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR
CCEECCCCCEEEEECCCCEEEEECCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]